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gauravsk
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ranacapa
R package for downstream analysis for anacapa eDNA pipeline
https://f1000research.com/articles/7-1734/v1
GNU General Public License v3.0
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Error in `ggplot2::geom_ribbon()`:
#56
gabrielet
closed
3 months ago
0
Maximum upload size exceeded
#55
zhuangfjnu
opened
2 years ago
0
how to draw a line?
#54
marwa38
opened
2 years ago
3
add variable selection option to taxonomy barplot
#53
kballare
opened
2 years ago
0
Update server.R to include continuous variables in plots
#52
kballare
opened
2 years ago
0
ranacapa_automated.R file link is broken
#51
sastinson
opened
3 years ago
0
test not working
#50
UCcongenomics
opened
3 years ago
0
Barplots size and other suggestions for improvements
#49
domenico-simone
opened
4 years ago
0
ggrare_grouping samples
#48
aalex83
opened
4 years ago
0
Fix typo varible -> variable
#47
yvanlebras
opened
4 years ago
0
Error in seq.default(1, tot[i], by = step) : wrong sign in 'by' argument
#46
rlh13
opened
5 years ago
1
Error running runRanacapa()
#45
bastianegeter
closed
5 years ago
3
small app edits
#44
madcowen
closed
5 years ago
1
remove taxonomy paths with 0 occurrences from taxon table
#43
gauravsk
closed
6 years ago
1
bigger rarefaction plots
#42
gauravsk
closed
5 years ago
1
download rarefied files
#41
gauravsk
closed
5 years ago
1
Development
#40
gauravsk
closed
6 years ago
0
changing file path to match input!
#39
gauravsk
closed
6 years ago
0
Development
#38
gauravsk
closed
6 years ago
0
Mad dev
#37
gauravsk
closed
6 years ago
0
switch to using read_delim everywhere
#36
gauravsk
closed
6 years ago
1
Add Markdown to DESCRIPTION
#35
gauravsk
closed
6 years ago
0
Mad dev
#34
gauravsk
closed
6 years ago
0
Mad dev
#33
gauravsk
closed
6 years ago
0
Rarefaction slider should only go up to the max number of seqs in any one sample; otherwise potential for an error
#32
gauravsk
closed
6 years ago
0
Development
#31
gauravsk
closed
6 years ago
0
Development
#30
gauravsk
closed
6 years ago
0
taxonomy barplot categories
#29
madcowen
closed
6 years ago
0
first step in importing biom tables- wonder if we'll need to do more.…
#28
gauravsk
closed
6 years ago
0
include decontamination capability
#27
gauravsk
closed
6 years ago
2
Organize the app into "modules" so that the info is not all written in ui.R
#26
gauravsk
closed
6 years ago
0
lots of @madcowen's tweaks; restructuring namespace etc.
#25
gauravsk
closed
6 years ago
0
Give people the option to treat continuous variable as categorical, don't force it
#24
gauravsk
closed
6 years ago
1
It might be worth redoing how we manage package imports
#23
gauravsk
closed
6 years ago
2
laundry list of things to be fixed
#22
gauravsk
closed
6 years ago
7
some useful info for app deployment
#21
gauravsk
opened
6 years ago
2
Development
#20
gauravsk
closed
6 years ago
0
cleanup and close simple issues
#19
gauravsk
closed
6 years ago
0
add option for no rarefaction
#18
gauravsk
closed
6 years ago
0
Merge in more unit tests and tweaking variable names
#17
gauravsk
closed
6 years ago
0
add unit tests for test_input_file.R
#16
gauravsk
closed
6 years ago
0
Updates from development
#15
gauravsk
closed
6 years ago
0
Maddi's updates, pt1
#14
gauravsk
closed
6 years ago
0
check if this is an issue in the app
#13
gauravsk
closed
6 years ago
1
Rename runExample
#12
gauravsk
closed
6 years ago
0
"continuous variable cannot be mapped to shape"
#11
gauravsk
closed
6 years ago
2
Development
#10
gauravsk
closed
6 years ago
0
allow qiime output to be loaded in for visualization
#9
gauravsk
closed
6 years ago
0
allow the use of the rarefied tables for barplot/heatmap
#8
gauravsk
closed
6 years ago
0
Development
#7
gauravsk
closed
6 years ago
0
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