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gbif
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pipelines
Pipelines for data processing (GBIF and LivingAtlases)
Apache License 2.0
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Retries in clustering, when there is an HBase table outage
#977
timrobertson100
closed
8 months ago
1
Bump org.elasticsearch:elasticsearch from 7.9.2 to 7.17.13
#976
dependabot[bot]
closed
7 months ago
1
#964 linking grscicoll occurrences
#975
marcos-lg
closed
7 months ago
0
Implement lenient comparison for the backbone impact pipeline
#974
timrobertson100
closed
8 months ago
0
Diagnostic: Missing names on record
#973
timrobertson100
closed
8 months ago
6
Bump com.rabbitmq:amqp-client from 4.8.0 to 5.18.0 in /gbif/coordinator/tasks
#972
dependabot[bot]
closed
7 months ago
1
Bump com.rabbitmq:amqp-client from 3.1.4 to 5.18.0 in /gbif/validator/validator-checklists
#971
dependabot[bot]
closed
7 months ago
1
Bump avro.version from 1.8.2 to 1.11.1.7.1.9.0-387
#970
dependabot[bot]
closed
7 months ago
1
Bump org.apache.avro:avro from 1.11.1 to 1.11.3
#969
dependabot[bot]
closed
8 months ago
1
Bump com.fasterxml.woodstox:woodstox-core from 5.3.0 to 5.4.0 in /gbif/coordinator/tasks
#968
dependabot[bot]
closed
8 months ago
1
Bump org.apache.spark:spark-core_2.12 from 2.4.5 to 3.3.3 in /livingatlas/pipelines
#967
dependabot[bot]
closed
8 months ago
1
Hide/Delete empty executions
#966
muttcg
closed
8 months ago
1
Configure Renovate
#965
renovate[bot]
closed
7 months ago
1
GRSciColl - link occurrences with basis of record "material sample"
#964
ManonGros
closed
7 months ago
2
Bump org.apache.zookeeper:zookeeper from 3.4.14 to 3.7.2 in /gbif/validator
#963
dependabot[bot]
closed
8 months ago
1
When you run Fragmenter from Registry UI, it runs also HDFS_VIEW stage
#962
muttcg
closed
8 months ago
1
Bump com.squareup.okio:okio from 2.10.0 to 3.4.0
#961
dependabot[bot]
closed
9 months ago
1
Bump org.apache.tika:tika-core from 1.17 to 1.28.3 in /gbif/validator
#960
dependabot[bot]
closed
9 months ago
1
Bump org.apache.xmlgraphics:batik-transcoder from 1.13 to 1.17 in /livingatlas/bitmap
#959
dependabot[bot]
closed
9 months ago
1
Bump org.xerial.snappy:snappy-java from 1.1.8.4 to 1.1.10.4 in /livingatlas/pipelines
#958
dependabot[bot]
closed
9 months ago
1
Fragmenter stage doesn't update status in registry correctly
#957
muttcg
opened
9 months ago
3
Possible missing rank in name lookup
#956
timrobertson100
closed
9 months ago
1
Minor: config/metrics.properties not found
#955
timrobertson100
closed
9 months ago
1
Improve logging in EventsInterpretationCallback.runDistributed
#954
timrobertson100
closed
8 months ago
5
VERBATIM_TO_IDENTIFIER runs small datasets on Spark
#953
timrobertson100
closed
9 months ago
2
Stuck datasets in pipelines CLI
#952
timrobertson100
closed
8 months ago
4
Reprocessing from UI doesn't run all steps
#951
timrobertson100
closed
9 months ago
5
Killed / failed ingestions that are removed cannot be reprocessed
#949
timrobertson100
closed
8 months ago
1
Fragmenter process running out of memory
#948
MattBlissett
closed
8 months ago
1
fix for ALAOccurrenceIssue.FIRST_OF_YEAR
#947
adam-collins
closed
8 months ago
0
#945 check rank before setting epithets
#946
timrobertson100
closed
9 months ago
0
Generic name set for higher ranks
#945
timrobertson100
closed
9 months ago
3
#217 use scientificNameID, taxonID and taxonConceptID
#944
timrobertson100
closed
10 months ago
0
#217 use scientificNameID, taxonID and taxonConceptID
#943
timrobertson100
closed
10 months ago
1
Support publisher provided typifiedName
#942
timrobertson100
opened
10 months ago
1
#939 linking only specimen records to grscicoll
#941
marcos-lg
closed
10 months ago
0
Linking occurrences to GRSciColl institution
#940
ManonGros
closed
10 months ago
5
GRSciColl - only link occurrence specimens to GRSciColl
#939
ManonGros
closed
10 months ago
1
Reprocessing old event datasets causes registry state update issues
#938
timrobertson100
closed
10 months ago
4
ingestion management - create tag with publisher key and/or ipt installation of dataset
#937
jhnwllr
closed
9 months ago
4
ingestion managment - show sample of old and new ids in issue
#936
jhnwllr
closed
9 months ago
1
"protocol" field set incorrectly
#935
MattBlissett
closed
8 months ago
1
Taxanomic matching
#934
derek-mba
closed
9 months ago
7
Bulk annotations missing on records with sampling
#933
djtfmartin
closed
11 months ago
0
Many Zookeeper connections during interpretation
#932
MattBlissett
opened
11 months ago
0
Stops interpretation before species match
#931
timrobertson100
closed
11 months ago
1
Step ending, but not being marked as completed
#930
MattBlissett
closed
8 months ago
2
Prefix imported conservation fields with raw_
#929
adam-collins
closed
7 months ago
0
Change organismQuantity from double to string
#928
adam-collins
closed
6 months ago
4
Fix datePrecision
#927
adam-collins
closed
12 months ago
0
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