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gbouras13
/
dnaapler
Reorients assembled microbial sequences
MIT License
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v0.8.1
#81
gbouras13
closed
2 weeks ago
0
Support reorientation of as many contigs as possible
#80
schorlton-bugseq
opened
1 month ago
0
update docs
#79
gbouras13
closed
2 months ago
0
v0.8.0
#78
gbouras13
closed
2 months ago
0
Error with subset of samples in pipeline
#77
KR0manova
closed
2 months ago
2
Option to ignore errors linked to genome
#76
jsgounot
closed
2 months ago
7
Add archaea support
#75
gbouras13
closed
2 months ago
7
dnaapler all --autocomplete not running
#74
schorlton-bugseq
closed
2 months ago
4
custom dnaapler all v0.7.0
#73
gbouras13
closed
8 months ago
1
v0.6.0
#72
gbouras13
closed
8 months ago
1
min and max length criteria
#71
sejmodha
opened
8 months ago
1
Add joss paper
#70
gbouras13
closed
8 months ago
0
bump version, also make release easier with ci
#69
gbouras13
closed
8 months ago
1
Dev [skip ci]
#68
gbouras13
closed
8 months ago
0
Add option to annotate fasta headers with Gene_Reoriented
#67
ammaraziz
closed
8 months ago
2
fix typos continuous integration/deployment [skip ci]
#66
gbouras13
closed
9 months ago
0
remove https from mgen dois [skip ci]
#65
gbouras13
closed
9 months ago
0
v0.5.0
#64
gbouras13
closed
10 months ago
0
Option to specify start gene type in all mode
#63
oschwengers
closed
8 months ago
3
Dnaapler rotates non-circularized contigs
#62
MostafaYA
closed
10 months ago
3
Jossreviews minor typos in docs
#61
gbouras13
closed
11 months ago
0
beef up docs [skip ci]
#60
gbouras13
closed
11 months ago
0
fix stderr and add example.md
#59
gbouras13
closed
11 months ago
0
Jossreviews
#58
gbouras13
closed
11 months ago
0
Add install instructions and `largest` docs
#57
gbouras13
closed
11 months ago
0
Clean up installation docs
#56
gbouras13
closed
11 months ago
0
Clean up CONTRIBUTING.md
#55
gbouras13
closed
11 months ago
0
Jossreviews
#54
gbouras13
closed
11 months ago
0
Update documentation
#53
Vini2
closed
11 months ago
1
[JOSS Review] Clarifying the fallback behaviour from BLAST to pyrodigal
#52
mkerin
closed
10 months ago
8
[JOSS Review] Installation instructions in the readthedocs
#51
mkerin
closed
11 months ago
2
[JOSS Review] Authorship list
#50
mkerin
closed
11 months ago
2
[JOSS Review] Typos in CONTRIBUTING.md
#49
mkerin
closed
11 months ago
2
[JOSS Review] - Documentation
#48
vinisalazar
closed
10 months ago
4
[JOSS Review] - Text corrections and suggestions
#47
vinisalazar
closed
10 months ago
3
update readme [skip ci]
#46
gbouras13
closed
11 months ago
0
v 0.4.0
#45
gbouras13
closed
11 months ago
1
Improve autocomplete
#44
simone-pignotti
closed
11 months ago
4
update histry and bump version
#43
gbouras13
closed
1 year ago
0
0.3.2 updates gene finding to support pyrodigal v3
#42
gbouras13
closed
1 year ago
1
[Question] Do reoriented contigs match the strandedness of the balst result?
#41
rpetit3
closed
1 year ago
4
Dev
#40
gbouras13
closed
1 year ago
0
Fix #38
#39
samnooij
closed
1 year ago
1
Error with dnaapler all on bacterial chromosome and plasmids
#38
samnooij
closed
1 year ago
3
fix typo in logging
#37
samnooij
closed
1 year ago
1
Minor fixes to `dnaapler all`
#36
gbouras13
closed
1 year ago
1
Adds `dnaapler all` fixes #34
#35
gbouras13
closed
1 year ago
1
add ignore option as well as all databases option
#34
alexweisberg
closed
1 year ago
12
cosmetic changes
#33
gbouras13
closed
1 year ago
0
cosmetic readme changes
#32
gbouras13
closed
1 year ago
0
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