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generatebio
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chroma
A generative model for programmable protein design
Apache License 2.0
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Is the training code available?
#53
LtECoD
opened
2 weeks ago
0
linking downloaded weight for offline chroma usage
#52
peptidelinks
opened
1 month ago
3
Example of training a classifier based on graphclassifier
#51
Zebreu
opened
1 month ago
0
Create functional proteins from a given protein Template/Profile?
#50
Travis13197
opened
1 month ago
1
SWE-agent[bot] PR to fix: Batched conditional generation
#49
wujiewang
opened
2 months ago
0
Design multiple sequences for the same input structure
#48
prateekbansal97
closed
2 months ago
4
Made a few adjustments, please check out. 'samples' issue and batch splitting.
#47
sona9soba
opened
4 months ago
0
RuntimeError: Expected all tensors to be on the same device, but found at least two devices, cuda:0 and cpu!
#46
ppxwwtaking
closed
4 months ago
4
How to design the interface residues within complex.
#45
ning-2022
closed
4 months ago
0
HTTPError: 500 Server Error: Internal Server Error for url: https://chroma-weights.generatebiomedicines.com/downloads?token=%5B<api-key>%5D&weights=chroma_backbone_v1.0.pt
#44
Hanoriega
closed
4 months ago
5
De-novo binder generation with a hotspot
#43
kushnarang
opened
5 months ago
0
How to do deterministic sampling?
#42
Lifedecoder
closed
5 months ago
4
Computing the TM score against the PDB dataset
#41
ahof1704
opened
5 months ago
0
Tensors not on the same device
#40
Bloeci
closed
4 months ago
2
Substructure Conditioner - Supplementary Appendix O
#39
jlotthammer
closed
4 months ago
4
Prediction of secondary structure
#38
ahof1704
closed
5 months ago
2
Example on how to condition on Sequence (and Structure)
#37
fabiotrovato
closed
5 months ago
11
Constrained diffusion on one chain in a protein complex
#36
caseysm
closed
5 months ago
3
Progress Bars during Sampling
#35
LaurinLang
closed
5 months ago
1
problem about "protein = chroma.design(protein)"
#34
ning-2022
closed
6 months ago
3
Question for CDRs Method
#33
Charlesjc-lab
closed
6 months ago
3
the structure of sequences generated by chroma.design()
#32
Lyn-666
closed
5 months ago
5
Where could I find the code to generate the results in paper fig3 b?
#31
songhe2009
opened
6 months ago
0
Length-variable design with substructure conditioner
#30
Immortals-33
closed
6 months ago
4
'display' issue
#29
venuv
closed
6 months ago
2
ProClass Conditioner List of Values
#28
dannyoo
closed
7 months ago
1
Binder design notebook with specified hotspot
#27
Samuel-gwb
closed
5 months ago
3
Fix small typos in README.md
#26
amorehead
opened
7 months ago
0
Batched conditional generation
#25
wujiewang
opened
7 months ago
0
Strange output from inpainting
#24
hnisonoff
closed
6 months ago
6
Great work! Question re. weight format/transformers 4.35.2
#23
lamm-mit
closed
5 months ago
2
Selection syntax
#22
bobbyhollingsworthiv
closed
7 months ago
2
Is it possible to save the potts params used for sequence sampling?
#21
sokrypton
closed
7 months ago
1
Conditioning on AA composition
#20
AlexWindels
closed
6 months ago
2
Simple example fails on windows 11 on jupyter lab
#19
eugenio
closed
7 months ago
5
Minor docstring fixes
#18
chaitjo
opened
7 months ago
2
Installation fails on windows 11 and wsl2 with python >= 3.11
#17
eugenio
closed
7 months ago
3
Improve sampling behaviour with samples > 1
#16
elkoz
opened
7 months ago
3
long time persist model parameters
#15
cyrushu
opened
7 months ago
0
De-novo binder generation
#14
kushnarang
closed
7 months ago
7
fileNotFound error
#13
ecass777
closed
7 months ago
6
Protein folding
#12
kushnarang
closed
7 months ago
1
Running chroma from docker
#11
e-osipov
closed
7 months ago
3
Expected all tensors to be on the same device
#10
QUEST2179
closed
7 months ago
1
seeking advices for conditional binder design
#9
vuhongai
closed
7 months ago
3
Chroma use on read-only file systems
#8
jasonkey
closed
7 months ago
8
Cannot select multiple index ranges of protein for SubstructureConditioner
#7
SIAndersson
closed
7 months ago
4
ImportError: cannot import name 'api' from 'chroma'
#6
nickyoungforu
closed
7 months ago
2
Doc on design_selection in chroma.design
#5
v-shaoningli
closed
7 months ago
3
Trajectory cif file won't open in ChimeraX
#4
Guillawme
closed
7 months ago
4
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