search

genomic-medicine-sweden / gms-artic

A nextflow pipeline with a GMS touch for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbioinformatics).
GNU Affero General Public License v3.0
9 stars 6 forks source link

Pangolin typing with medaka #36

Closed henningonsbring closed 2 years ago

henningonsbring commented 2 years ago

This PR allows pangolin types to be assigned when running analysis of nanopore data with the medaka workflow