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geodesymiami / rsmas_insar

RSMAS InSAR code
https://rsmas-insar.readthedocs.io/
GNU General Public License v3.0
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Instructions for TACC to run minsar code. #460

Open falkamelung opened 3 years ago

falkamelung commented 3 years ago
  1. copy directory /home1/05861/tg851601/accounts to you /home directory
  2. Install code in directory $RSMAS_INSAR (without /rsmas_insar) as described here. ((copy-paste starting at git clone https://github.com/geodesymiami/rsmas_insar.git to Orbit and aux files )
  3. Add to your .bashrc 
    
alias s=source
export CPL_ZIP_ENCODING=UTF-8
alias s.bs1='export RSMASINSAR_HOME=$SCRATCH/code1/rsmas_insar; cd $RSMASINSAR_HOME; s ~/accounts/platforms_defaults.bash; s setup/environment.bash; export PATH=$ISCE_STACK/topsStack:$PATH; s ~/accounts/alias.bash; s ~/accounts/login_alias.bash; cd -;'

unset PYTHONPATH alias git='/usr/bin/git' umask 007

4. After sourcing your environment using `s.bs1` run 
```minsarApp.bash $SAMPLESDIR/GalapagosSenDT128.template```

This will download data, a DEM and after about 5 minutes start a workflow using `sbatch`. There are 11 steps, each with one or multiple jobs. When running you should see this printed to your terminal:

Jobfiles to run: /scratch/05861/tg851601/GalapagosSenDT128/run_files/run_02_unpack_secondary_slc_0.job

| File Name | Additional Tasks | Step Active Tasks | Total Active Tasks | Active Jobs | Message |

| run_02_unp...y_slc_0 | 14 | 0/500 | 0/1000 | 0/25 | sbatch message: