There in a conflict that occurs when intel/19.1.1 is loaded two or more times on frontera. Loading it once does not cause the problem. After module purge it does not happen. The solution is module purge in jobfile prior to isce/launcher commands
computeBaseline.py --help
This is the Open Source version of ISCE.
Some of the workflows depend on a separate licensed package.
To obtain the licensed package, please make a request for ISCE
through the website: https://download.jpl.nasa.gov/ops/request/index.cfm.
Alternatively, if you are a member, or can become a member of WinSAR
you may be able to obtain access to a version of the licensed sofware at
https://winsar.unavco.org/software/isce
usage: computeBaseline.py [-h] -m REFERENCE -s SECONDARY -b BASELINEFILE
Use polynomial offsets and create burst by burst interferograms
optional arguments:
-h, --help show this help message and exit
-m REFERENCE, --reference REFERENCE
Directory with reference acquisition
-s SECONDARY, --secondary SECONDARY
Directory with secondary acquisition
-b BASELINEFILE, --baseline_file BASELINEFILE
An output text file which contains the computed baseline
module load intel/19.1.1
computeBaseline.py --help
This is the Open Source version of ISCE.
Some of the workflows depend on a separate licensed package.
To obtain the licensed package, please make a request for ISCE
through the website: https://download.jpl.nasa.gov/ops/request/index.cfm.
Alternatively, if you are a member, or can become a member of WinSAR
you may be able to obtain access to a version of the licensed sofware at
https://winsar.unavco.org/software/isce
Traceback (most recent call last):
File "/home1/05861/tg851601/code/rsmas_insar/3rdparty/miniconda3/lib/python3.8/site-packages/numpy/core/__init__.py", line 22, in <module>
from . import multiarray
File "/home1/05861/tg851601/code/rsmas_insar/3rdparty/miniconda3/lib/python3.8/site-packages/numpy/core/multiarray.py", line 12, in <module>
from . import overrides
File "/home1/05861/tg851601/code/rsmas_insar/3rdparty/miniconda3/lib/python3.8/site-packages/numpy/core/overrides.py", line 7, in <module>
from numpy.core._multiarray_umath import (
ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/home1/05861/tg851601/code/rsmas_insar/3rdparty/miniconda3/share/isce2/topsStack/computeBaseline.py", line 12, in <module>
import s1a_isce_utils as ut
File "/home1/05861/tg851601/code/rsmas_insar/3rdparty/miniconda3/share/isce2/topsStack/s1a_isce_utils.py", line 1, in <module>
from coregSwathSLCProduct import coregSwathSLCProduct
File "/home1/05861/tg851601/code/rsmas_insar/3rdparty/miniconda3/share/isce2/topsStack/coregSwathSLCProduct.py", line 4, in <module>
from isceobj.Sensor.TOPS.TOPSSwathSLCProduct import TOPSSwathSLCProduct
File "/home1/05861/tg851601/code/rsmas_insar/3rdparty/miniconda3/lib/python3.8/site-packages/isce/components/isceobj/Sensor/TOPS/TOPSSwathSLCProduct.py", line 6, in <module>
import numpy as np
File "/home1/05861/tg851601/code/rsmas_insar/3rdparty/miniconda3/lib/python3.8/site-packages/numpy/__init__.py", line 145, in <module>
from . import core
File "/home1/05861/tg851601/code/rsmas_insar/3rdparty/miniconda3/lib/python3.8/site-packages/numpy/core/__init__.py", line 48, in <module>
raise ImportError(msg)
ImportError:
IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
Importing the numpy C-extensions failed. This error can happen for
many reasons, often due to issues with your setup or how NumPy was
installed.
We have compiled some common reasons and troubleshooting tips at:
https://numpy.org/devdocs/user/troubleshooting-importerror.html
Please note and check the following:
* The Python version is: Python3.7 from "/opt/apps/intel19/python3/3.7.0/bin/python3"
* The NumPy version is: "1.20.3"
and make sure that they are the versions you expect.
Please carefully study the documentation linked above for further help.
Original error was: No module named 'numpy.core._multiarray_umath'
There in a conflict that occurs when intel/19.1.1 is loaded two or more times on frontera. Loading it once does not cause the problem. After
module purge
it does not happen. The solution ismodule purge
in jobfile prior to isce/launcher commands