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Reconceptualize "Research Teams" tab to "Datasets" #19

Closed anngvu closed 1 year ago

anngvu commented 1 year ago

The tab is currently called "Research Teams", which is confusing/not great. πŸ˜• image

@cconrad8 originally pointed out that it maybe should be "Datasets" -- see discussion https://github.com/gf-dcc/portal/discussions/16#discussioncomment-5746190.

Looking at the code, we even see that the actual component refers to ATLAS. Let's change title to "Datasets" and better re-conceptualize what to display. There are usually going to be multiple datasets in an atlas (i.e. an atlas is a collection of datasets), so ultimately we'll have something that looks like:

Atlas Cancer Research Team(s) Dataset Title Description Data Contributor # Cases # Files Viewer AccessionLink Governance Phase
A human breast atlas integrating single-cell proteomics and transcriptomics Breast Brugge scRNA-seq data * * * * πŸ‘οΈβ€πŸ—¨οΈ syn* 1
A human breast atlas integrating single-cell proteomics and transcriptomics Breast Brugge t-CYCIF * * * * πŸ‘οΈβ€πŸ—¨οΈ syn* 1
Atlas of BRCA-associated ovarian cancer Ovarian Drapkin H&E images * * * * πŸ‘οΈβ€πŸ—¨οΈ syn* 1
Atlas of BRCA-associated overian cancer Ovarian Drapkin *-seq * * * * πŸ‘οΈβ€πŸ—¨οΈ syn* 1
Collaborative -omics atlas (provisional title) Breast Brugge, Ellisen, Nathason ATAC-seq * * * * πŸ‘οΈβ€πŸ—¨οΈ syn* 1
Collaborative -omics atlas (provisional title) Breast Brugge, Ellisen, Nathason DNA-seq * * * * πŸ‘οΈβ€πŸ—¨οΈ syn* 1
Collaborative -omics atlas (provisional title) Breast Brugge, Ellisen, Nathason Tapestri * * * * πŸ‘οΈβ€πŸ—¨οΈ syn* 1
Collaborative -omics atlas (provisional title) Breast Brugge, Ellisen, Nathason *-seq * * * * πŸ‘οΈβ€πŸ—¨οΈ syn* 1
Atlas of the microbiome and immunological correlates in breast cancer Breast Eng Microbiome sequencing * * * * πŸ‘οΈβ€πŸ—¨οΈ syn* 1
Atlas of the microbiome and immunological correlates in breast cancer Breast Eng Immune gene profiling * * * * πŸ‘οΈβ€πŸ—¨οΈ syn* 1
Atlas of the microbiome and immunological correlates in breast cancer Breast Eng Multiplex cytokine assay data * * * * - syn* 1

Notes:

anngvu commented 1 year ago

Add assay

anngvu commented 1 year ago

Rethink Atlas -> ?