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ghli16 / GTAE-VF

Identifying virulence factors using graph transformer autoencoder with ESMFold-predicted structures
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The question about dataset #2

Open pejoy0 opened 2 weeks ago

pejoy0 commented 2 weeks ago

Thank you for your excellent work. Research on virulence factors is of great significance, and we appreciate that you have made the complete code and dataset available, which is highly commendable. We would like to kindly request the pre-split training, validation, and test sets as well, as this would greatly facilitate further research in this area.

ghli16 commented 2 weeks ago

Thank you for your interest in our work. The dataset we used in our paper originates from deepVF. For the training and validation sets, we used the deepVF training set and further subdivided it. The test set follows that of deepVF. For more details, you can refer to the original work of deepVF.