Guanghui Li, Peihao Bai, Jiao Chen, Cheng Liang, Identifying virulence factors using graph transformer autoencoder with ESMFold-predicted structures, Computers in Biology and Medicine, 2024, 170: 108062.
The code has been tested running under Python 3.8.16. The required packages are as follows:
Files
1.dataset: dataset.fasta store the protein sequence information of the training set, validation set, and test set