girirajanlab CN_Learn issues - Githubissues

girirajanlab / CN_Learn

CN-Learn

GNU General Public License v3.0

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Don't have docker

#18 GaoYauser opened 1 year ago
0
error while trying to remove sex chromosomes and 'chr' prefixes

#17 jazberna1 opened 3 years ago
0
CRAM files as input

#16 katherinef opened 4 years ago
0
# of training samples check doesn't seem to work

#15 martiliasf opened 4 years ago
0
xhmm_call_cnv.sh missing # throws silly error

#14 martiliasf opened 4 years ago
0
plinkseq link dead

#13 martiliasf opened 4 years ago
0
wrong number of columns in consolidate_val_ov.r

#12 martiliasf opened 4 years ago
4
Error running Clamms and Codex

#11 sdjpena opened 4 years ago
1
Error running canoes_call_CNVs.sh

#10 rosaricla opened 4 years ago
1
annotate_window.sh buggy

#9 martiliasf opened 4 years ago
3
please create sample gold standard file

#8 martiliasf opened 4 years ago
1
error at canoes_call_CNV.sh

#7 kokyriakidis opened 5 years ago
1
Wrapper scripts and container are not portable

#6 moskalenko opened 5 years ago
0
ERROR for exome capture prob file

#5 jaybee84 opened 5 years ago
1
REF_GENOME_PATH variable does not correspond to valid file

#4 laura-budurlean opened 5 years ago
0
GC content and CANOES give different value

#3 tavallaie closed 5 years ago
1
I can not detect gold-standard CNVs at step8

#2 KYama2019 opened 5 years ago
2
CN_Learn Pipeline Issues

#1 eugenegardner opened 5 years ago
3