gl186 SprintFinish issues

gl186 / SprintFinish

Sprint 2 and final assessment project for Group 1 (Module 3 PGCert Clinical Bioniformatics Intro to Programming)

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Merge pull request #72 from gl186/Team-2

#73 LMP2005 closed 8 months ago
0
Merge pull request #71 from gl186/main

#72 LMP2005 closed 8 months ago
0
Merge pull request #68 from gl186/Team-2

#71 LMP2005 closed 8 months ago
0
joining main with varan

#70 Lindaalnsour opened 8 months ago
1
Joining Main with Varan (trial1)

#69 Lindaalnsour closed 8 months ago
1
Module 2_VV_Removed NM_000088.4 from example

#68 LMP2005 closed 8 months ago
0
Integration of functions and returns into Main.py for Modules 3-5

#67 SonjaR-UniMan closed 8 months ago
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Updated URL

#66 LMP2005 closed 8 months ago
0
Unit test for Module 3 added to tests folder

#65 SonjaR-UniMan closed 8 months ago
1
enhacements for app.py and supporting xml response.

#64 Lindaalnsour closed 8 months ago
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Add test_unit_module5_VR_SPDI.py

#63 ayurahman closed 8 months ago
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Add SPDI filter function to module5_VR_SPDI_code.py

#62 ayurahman closed 8 months ago
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Add module5_VR_SPDI_code.py for consideration into main.py

#61 ayurahman closed 8 months ago
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Add Modules. to module4_VEP_code_only.py as per Sonja suggestion

#60 ayurahman closed 8 months ago
0
Adapting to only give back SPDIformat for HGVS genomic variant

#59 SonjaR-UniMan closed 8 months ago
4
_rename the main.py file to app.py

#58 Lindaalnsour closed 8 months ago
1
update app.py

#57 Lindaalnsour opened 8 months ago
2
Test_unit_module4_VEP.py only runs correctly when it is in the same directory as module4_VEP_code_only.py

#56 ayurahman opened 8 months ago
4
Rename test_unit_module4_VEP.py

#55 ayurahman closed 8 months ago
0
Team 4

#54 ayurahman closed 8 months ago
0
Updated UserGuide to include information on how to run the software.

#53 LMP2005 closed 8 months ago
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README.MD

#52 LMP2005 opened 8 months ago
0
Module reorg

#51 SonjaR-UniMan closed 8 months ago
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Tidy up of md files.

#50 LMP2005 closed 8 months ago
0
Update of Installation.md

#49 LMP2005 closed 8 months ago
0
Pushed from Team 2 branch in error

#48 LMP2005 opened 8 months ago
1
Restructuring module 5

#47 LMP2005 opened 8 months ago
1
Team 2

#46 LMP2005 closed 8 months ago
2
Linking

#45 tophie97 opened 8 months ago
3
Team 2

#44 LMP2005 closed 8 months ago
0
Restructured module 2 code

#43 LMP2005 opened 8 months ago
0
Resolves issue 41

#42 Lindaalnsour closed 8 months ago
5
Restructure module 1 to be a function

#41 Lindaalnsour opened 8 months ago
4
Team 2

#40 LMP2005 closed 8 months ago
3
Add test_VEP_data.json for module4 testing

#39 ayurahman closed 8 months ago
0
Renamed the log file to remove traces of api

#38 ayurahman closed 8 months ago
0
Renamed the file to match the rest

#37 ayurahman closed 8 months ago
0
Team 4

#36 ayurahman closed 8 months ago
0
Changed path in logger

#35 ayurahman closed 8 months ago
0
Team 4

#34 ayurahman closed 8 months ago
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Addded logging to rev_Sonja_code_w_logger.py

#33 ayurahman closed 8 months ago
0
Rename the file as module4_VEP_code_w_logger.py

#32 ayurahman closed 8 months ago
0
Added restructured module3 rev_Sonja_code_only.py

#31 ayurahman closed 8 months ago
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Why we got confused about the API thingy

#30 ayurahman opened 8 months ago
2
created in error

#29 LMP2005 closed 8 months ago
0
Test Folder for unit/functional testing

#28 LMP2005 opened 8 months ago
3
Project mainpy

#27 gl186 opened 8 months ago
0
Push rejected

#26 tophie97 opened 8 months ago
7
Added stable module2 logger

#25 Lindaalnsour closed 8 months ago
0
adding 38

#24 Lindaalnsour closed 8 months ago
0