issues
search
globalbioticinteractions
/
nomer
maps identifiers and names to other identifiers and names
GNU General Public License v3.0
18
stars
3
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
suggest to incorporate best practices mentioned in Horton T, Marsh L, Bett BJ, Gates AR, Jones DOB, Benoist NMA, Pfeifer S, Simon-Lledó E, Durden JM, Vandepitte L and Appeltans W (2021) Recommendations for the Standardisation of Open Taxonomic Nomenclature for Image-Based Identifications. Front. Mar. Sci. 8:620702. doi: 10.3389/fmars.2021.620702
#189
jhpoelen
opened
2 months ago
0
java.lang.IllegalArgumentException: need non-empty list of names
#188
nleguillarme
closed
2 months ago
3
support offline-enabled matcher for Interim Register Marine and Nonmarine Genera
#187
jhpoelen
opened
2 months ago
0
support offline-enabled matcher for iNaturalist Taxonomy
#186
jhpoelen
opened
2 months ago
0
support offline-enable matcher for fishbase/sealifebase taxa
#185
jhpoelen
opened
2 months ago
0
enable name-based lookup for EOL offline taxon matcher
#184
jhpoelen
closed
2 months ago
2
nomer stops on parallel indexing of same resource
#183
jhpoelen
closed
2 months ago
2
[nomer append globi-correct] on single lowercase long text phrase takes ~1 minute
#182
jhpoelen
closed
2 months ago
3
support offline-enabled wikidata taxon matcher
#181
jhpoelen
closed
3 months ago
6
NCBI taxonomy reports equivalence between [Candidatus Endoriftia persephone] and [Endoriftia persephone] but Nomer's NCBI matcher does not
#180
jhpoelen
closed
3 months ago
3
WoRMS: accepted taxon id urn:lsid:marinespecies.org:taxname:614620 referenced as accepted name usage id in urn:lsid:marinespecies.org:taxname:110231, but urn:lsid:marinespecies.org:taxname:614620 is not provided.
#179
jhpoelen
closed
3 months ago
6
Bombus var. cayennensis draenerti Friese, 1931 Bombus var cayennensis jundiahyensis Friese, 1931: suspicious synonyms of Bombus pauloensis on discoverlife page
#178
jhpoelen
opened
3 months ago
2
for discoverlife matcher "path.kingdom.name" is empty even though "path" and "pathIds" are populated
#177
jhpoelen
closed
3 months ago
2
unreported "Melissodes (Melissodes) tepidus timberlakei Cockerell, 1926, valid subspecies of Melissodes tepidus Cresson, 1878
#176
jhpoelen
closed
4 months ago
4
protect repo against GitHub Action Worms
#175
jhpoelen
closed
6 months ago
2
Add NodeJS wrapper note
#174
zedomel
closed
6 months ago
1
What's the default matcher?
#173
mielliott
closed
6 months ago
8
Bump org.apache.commons:commons-compress from 1.21 to 1.26.0 in /nomer
#172
dependabot[bot]
closed
7 months ago
0
Bump org.apache.commons:commons-compress from 1.21 to 1.26.0 in /nomer-taxon-resolver
#171
dependabot[bot]
closed
7 months ago
0
Bump org.htmlunit:htmlunit from 3.3.0 to 3.9.0 in /nomer-taxon-resolver
#170
dependabot[bot]
closed
9 months ago
0
package nomer / nomer corpus as apptainer (formerly singularity)
#169
jhpoelen
opened
10 months ago
1
suggest to add support to link to "LifeGate 2021 is an interactive two-dimensional phylogenetic map. It is an attempt to arrange all known species (2.6 million) phylogenetically in an interactive zoomable user interface."
#168
jhpoelen
closed
6 months ago
1
make discoverlife matches resolve higher order taxa, in addition to species
#167
jhpoelen
closed
4 months ago
2
example of discoverlife homonym related to "Andrena supervirens"
#166
jhpoelen
opened
1 year ago
1
discover life taxonomic path does not appear to include genus as separate entry
#165
jhpoelen
closed
1 year ago
2
wfo: species names only match when quoted
#164
jhpoelen
closed
1 year ago
3
replacing taxon names Catalogue of Life yields no results, whereas appending names does
#163
jhpoelen
closed
1 year ago
2
Querying catalog of lie for just higher taxonomy fails.
#162
whitfarnum
closed
1 year ago
7
Subgenus added to Discover Life
#161
seltmann
closed
4 months ago
5
adding an equivalent of alignedAuthority for parsed name
#160
whitfarnum
closed
5 months ago
10
Better taxanomic resolution between family and genus on export by including SubFamily, Tribe, and Subtribe
#159
whitfarnum
closed
1 year ago
15
add support for matching names to phylogeny tips provided by Upham et al. 2019
#158
jhpoelen
opened
1 year ago
7
add support for Sherman's BTA
#157
jhpoelen
opened
1 year ago
0
add support for viral taxonomy for https://ictv.global/taxonomy
#156
jhpoelen
opened
1 year ago
2
validate-terms fails on "new" schema that includes authorship
#155
jhpoelen
opened
1 year ago
0
Nomer claims that Ixodes scapularis HAS_ACCEPTED_NAME Rhipicephalus bursa according by Catalogue of Life but . . . Catalogue of Life reports Ixodes scapularis as a name misapplied to Rhipicephalus bursa
#154
jhpoelen
opened
1 year ago
0
add support for Handbook Mammals of the World v2019
#153
jhpoelen
opened
1 year ago
0
suggest to align taxonomies with Pipistrellus aegyptius (J. Fischer, 1829)
#152
jhpoelen
opened
1 year ago
1
suggest to update batnames integration with their most recent 2023 release
#151
jhpoelen
opened
1 year ago
1
Unable to link to DiscoverLife Species Page by copy-pasting URL from browser
#150
jhpoelen
closed
4 months ago
2
Some names (e.g., Ancylandrena atoposoma) are currently on DiscoverLife's active site but not matched in Nomer via discoverlife
#149
jtmiller28
closed
4 months ago
27
add support for offline WoRMS matcher
#148
jhpoelen
closed
3 months ago
7
add support for offline IRMNG matcher
#147
jhpoelen
opened
1 year ago
0
Make information about the kakapo findable via Wikidata ID using an offline-wikidata matcher
#146
Daniel-Mietchen
opened
1 year ago
1
Genbank Fixer Upper - Genbank Taxonomic Updater
#145
jhpoelen
opened
1 year ago
4
add support for http://hesperomys.com/
#144
jhpoelen
opened
1 year ago
17
facilitate name matching by adding ability to "stem" names to help match gendered names
#143
jhpoelen
closed
2 months ago
51
I'd like to integrate the name alignment tool into my R script
#142
jhpoelen
opened
1 year ago
3
add support for aligning with Mammal Diversity Database https://mammaldiversity.org
#141
jhpoelen
closed
1 year ago
4
unexpected crash on parsing "unparsable" name [ad64ad57 a281 e b398 dddc7e953]
#140
jhpoelen
closed
1 year ago
0
Next