Workflow tutorial.

[joaander]

Description

Add a tutorial that teaches how to use HOOMD-blue in workflows defined by signac-flow. Also describes and demonstrates how to build restartable jobs in this framework.

Resolves: #41 References: #13

Checklist:

• [x] I have reviewed the Contributor Guidelines.
• [x] I agree with the terms of the HOOMD-blue Contributor Agreement.
• [x] My name is on the list of authors.

Questions for reviewers

Reviewers, please answer these questions in addition to any specific line-level comments you may have.

• Does the tutorial help you understand how to use HOOMD-blue to run simulations in workflows?
• Does the tutorial miss any important concepts? If yes, which ones?
• What concepts, if any, does the tutorial cover in too much detail for novice HOOMD users? What part do you think was too much?
• What concepts, if any, does the tutorial not cover with sufficient detail? What details need to be added?
• Is there anywhere that the tutorial uses fluid representations (using different words to describe the same thing)?

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[joaander]

Note, running some of these tutorial notebooks requires https://github.com/glotzerlab/hoomd-blue/pull/1193

[b-butler]

Very clean implementation. I left some comments on different signac features and conventions. The aggregate operation was very clean and simple. :+1: