These jupyter notebooks provide a tutorial for the HOOMD-blue simulation software and are included in HOOMD-blue's documentation.
You can install HOOMD-blue and run these examples interactively.
Clone the hoomd-examples repository and open the notebooks with the tool you prefer.
These examples use the following python packages:
You can install these from conda-forge:
mamba install fresnel freud gsd hoomd matplotlib pillow signac signac-flow