The implementation of the paper "SASA-Net: A spatial-aware self-attention mechanism for building protein 3D structure directly from inter-residue distances".
Install PyTorch 1.6+, python 3.7+
Clone the repo
git clone https://github.com/gongtiansu/SASA-Net.git
Install python packages
cd SASA-Net
pip install -r requirements.txt
run_SA.sh --fasta <fasta> --feat <profold_npz> --output <output_pdb>
cd example
./run_example.sh
Distributed under the MIT License. See LICENSE
for more information.