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goodwright
/
clipseq
The primary analysis pipeline for CLIP samples.
MIT License
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ARTR-seq Streamlined Version
#30
hanzhong-bai
opened
4 days ago
0
Upgrade schema
#29
samirelanduk
opened
3 weeks ago
0
Local config file is read but params are not applied
#28
neusmf
closed
3 months ago
1
Fixed UMICOLLAPSE and simple_view potential errors
#27
slbai01
closed
6 months ago
1
Make fields in sample CSV required
#26
samirelanduk
closed
1 year ago
0
Updates
#25
chris-cheshire
closed
1 year ago
0
fix input to rnamaps and summary
#24
CharlotteAnne
closed
1 year ago
0
Limit to CLIP sample category
#23
samirelanduk
closed
1 year ago
0
change umicollapse from process_medium to process_high
#22
CharlotteAnne
closed
1 year ago
0
fix error where norm xl files were printing instead of being saved
#21
CharlotteAnne
closed
1 year ago
0
fix channel structure issues
#20
CharlotteAnne
closed
1 year ago
0
Updates
#19
chris-cheshire
closed
1 year ago
0
Schema/Config Updates
#18
chris-cheshire
closed
1 year ago
0
Update CSV schema
#17
samirelanduk
closed
1 year ago
0
Updates
#16
chris-cheshire
closed
1 year ago
0
Feat flow
#15
chris-cheshire
closed
1 year ago
0
Chris updates
#14
chris-cheshire
closed
1 year ago
0
Update aws full test paths
#13
CharlotteAnne
closed
1 year ago
0
add process.errorStrategy = 'ignore'
#12
CharlotteAnne
closed
1 year ago
0
Is `test_full` working?
#11
tbrittoborges
opened
1 year ago
1
add testing for both zipped and non-zipped input files
#10
CharlotteAnne
opened
1 year ago
0
Feat flow
#9
CharlotteAnne
closed
1 year ago
0
Dev
#8
CharlotteAnne
closed
1 year ago
0
Feat prepareclipseq
#7
CharlotteAnne
closed
1 year ago
0
Feat transcriptomecrosslinks
#6
CharlotteAnne
closed
1 year ago
0
Dev
#5
CharlotteAnne
closed
1 year ago
0
Feat moveumitoheader
#4
CharlotteAnne
closed
1 year ago
0
Ci setup
#3
chris-cheshire
closed
1 year ago
0
Test PR
#2
chris-cheshire
closed
1 year ago
0
config inheritance
#1
CharlotteAnne
closed
1 year ago
1