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gravelLab
/
tracts
A set of tools for modelling ancestry patterns along the genome.
GNU General Public License v2.0
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Generalize parameterized demography to handle sex-biased demography
#37
sgravel
opened
3 months ago
0
Implement YAML representation for sex-biased admixture
#36
sgravel
opened
3 months ago
0
Problems of installing tracts and running example files
#35
wenyako
opened
3 months ago
10
Set setuptools version to 68.2.2 to fix installation issue
#34
gonzalez-delgado
closed
6 months ago
0
From rfmix2 to Tracts
#33
MarsicoFL
opened
9 months ago
0
issues running tracts2
#32
vicbp1
opened
1 year ago
2
Changed to using phase-type distributions for calculating expected tr…
#31
General-Solution
closed
1 year ago
0
Devel
#30
General-Solution
closed
1 year ago
0
Error when attempting to fix multiple parameters using ancestry proportions.
#29
General-Solution
opened
1 year ago
1
Tracts v2.0.0-beta
#28
General-Solution
closed
1 year ago
0
defining model and run tracts
#27
mandresapata
opened
1 year ago
4
Use phase-type distributions to speed things up and generalize
#26
sgravel
opened
1 year ago
0
Refactor driver script
#25
sgravel
opened
1 year ago
0
Make python3 the main branch once it is tested thoroughly
#24
sgravel
opened
1 year ago
0
Add tests
#23
sgravel
opened
1 year ago
0
Make model specification clearer
#22
sgravel
opened
1 year ago
0
How to cite your software?
#21
Xuelei-Dai
opened
2 years ago
1
ll_scale not used in many optimizers, and description unclear
#20
sgravel
opened
3 years ago
0
Erlang should be static function, not method
#19
sgravel
opened
3 years ago
0
chrom argument in ancestry_at_pos function
#18
sgravel
closed
3 years ago
1
len used as variable name in chopair
#17
sgravel
opened
3 years ago
0
Class naming convention
#16
sgravel
closed
2 months ago
0
func_args is not used
#15
sgravel
opened
3 years ago
1
Upgrade to python 3
#14
apragsdale
closed
3 years ago
0
Add demes support
#13
sgravel
opened
3 years ago
1
Make python 3 compatible
#12
sgravel
opened
3 years ago
0
issue w\ input file
#11
raveancic
closed
4 years ago
4
3 migration w/ 3 population Models
#10
dorozco1504
closed
4 years ago
3
Method for model selection
#9
dwuab
closed
4 years ago
1
4 populations sample models required?
#8
wjaratlerdsiri
closed
4 years ago
4
Add Travis CL for testing builds with PRs
#7
riddhishb
closed
4 years ago
0
Added setup.py file for installation
#6
riddhishb
closed
1 year ago
0
Composite demographic model
#5
tsani
closed
9 years ago
0
Important bug fix in improved plotting module
#4
tsani
closed
9 years ago
0
Improve plot aesthetics of fancyplotting.py
#3
tsani
closed
9 years ago
0
Adjust style to conform to Python standards and implement good-looking plots in Python
#2
tsani
closed
9 years ago
2
Local variable cleanup
#1
DomNelson
closed
9 years ago
0