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single_cell_data_integration
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switch to `highly_variable_genes` in all subprojects.
#20
grst
closed
5 years ago
0
What T cells are dysfunctional, actually - and how to find out?
#19
grst
opened
5 years ago
2
data normalization strategies
#18
grst
closed
5 years ago
0
Use scrublet for doublet detection.
#17
grst
closed
5 years ago
0
switch to gene symbols.
#16
grst
closed
5 years ago
0
trajectory inference
#15
grst
opened
5 years ago
1
CD8+ subtypes: exploratory analyses
#14
grst
closed
5 years ago
0
assess batch effect removal tools
#13
grst
closed
5 years ago
0
cell type annotations
#12
grst
closed
5 years ago
12
dropSeqPipe configuration
#11
grst
opened
5 years ago
4
single cell browser
#10
grst
closed
5 years ago
1
SmartSeq2 pipeline
#9
grst
opened
6 years ago
0
Raw data (FASTQ) alignment & quantification
#8
grst
opened
6 years ago
5
Batch effect removal tools
#7
grst
closed
5 years ago
4
RNA velocity
#6
grst
opened
6 years ago
1
cleaning of individual datasets.
#5
grst
closed
5 years ago
6
get raw data (FASTQ) and process using dropSeqPipe
#4
grst
closed
6 years ago
7
Pipeline stages - overview
#3
grst
closed
5 years ago
7
preprocessing at what point
#2
grst
closed
6 years ago
3
gene identifier remapping
#1
grst
closed
6 years ago
3
GWAS: associate cancer mutation with immune cell landscape
#21
grst
opened
6 years ago
0