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gtDMMB / RNAStructViz

Visualization, comparison, and analysis of RNA secondary structures via a cross-platform GUI
https://github.com/gtDMMB/RNAStructViz/wiki
GNU General Public License v3.0
17 stars 5 forks source link

crash after closing statistics window #58

Closed ceheitsch closed 4 years ago

ceheitsch commented 4 years ago

mathm2334:~ gtmath$ /usr/local/opt/rnastructviz/bin/RNAStructViz ⛔ ERROR: Handling unexpected SEGFAULT (SIGSEGV) signal.

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==== 🧬 RNAStructViz v1.9.6-testing -- RNA Secondary Structure Comparison Multi-Tool ====

ABOUT THIS APPLICATION:

Git Revision .............................. [Wed Nov 20 13:49:27 2019] Revision Date ............................. Darwin (18.5.0) [x86_64] @@ mathm2334 FLTK Library .............................. 1.4.0 (API #10400) FLTK-Config ............................... Cairo Library ............................. 1.16.0 Target Platform ........................... /usr/local/Cellar/fltkwithcairo/fltk-1.4.x-20191115-ee9ada96_4/bin/fltk-config Local Build Time .......................... RNAStructViz Launch Path Command .......... /usr/local/opt/rnastructviz/bin/RNAStructViz Current Working Directory (CWD) ........... /Users/gtmath Active System User (From ENV) ............. gtmath

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BUG REPORT INFORMATION: Please include a screenshot along with this information in any bug report you submit. New issues with the application can be submitted by following the instructions at « https://github.com/gtDMMB/RNAStructViz/wiki/BugReportingAndErrors »

maxieds commented 4 years ago

@ceheitsch Repeating, as a reminder for you in a couple of weeks, that this crash needs to be testing / tends to happen after exporting the generated stats to CSV file in the last tab of the window. I was unable to reproduce it exactly myself. Still planning to beat the tar out of my source code on a Mac for you this week to induce breakage. Tagging the issue for you to close.

ceheitsch commented 4 years ago

@maxieds I was trying out different comparisons. What happens if you try exporting before and after changing something?

maxieds commented 4 years ago

@ceheitsch Exporting, then changing the reference structure, re-calculating, and then exporting again definitely will cause a crash on my Mac OSX box. I'm trying to reproduce the conditions on Linux first. Will then backport a fix to Mac OS once the crash cannot be reproduced on my development box.

maxieds commented 4 years ago

@ceheitsch The lastest push into the development code should fix the issue. There were a couple of bugs that I made code patches to fix. When I add the next release (which should bring things to v1.9.9-testing), this issue should be fixed on Mac. I will try to do that sometime later this morning. For right now, I have one more code tweak I want to add to the select all functionality in the "Load Files" dialog. Once I'm done with that (and testing), you can test the newest release on your Mac laptop. This should provide a stable version of StructViz on both Mac and Linux.

Happy Turkey Day!

ceheitsch commented 4 years ago

Fixed!