maxieds
commented
4 years ago @afafbioinfo
It appears that you do not have the boost::filesystem library available to you at compile time. You will need to install it. The discussion in this WIKI link suggests that it shouldn't be that bad to get the full arsenal of boost::* sublibraries installed from source. If you have a Debian-based Linux (e.g., Ubuntu) available handy with sudo, try running the following to install the necessary dependencies:
$ sudo apt-get install libboost-all-devNote that if the next item in line is the OpenSSL library dependency, you can similarly install that by running:
$ sudo apt-get install libssl-devThese packages are documented in the WIKI here.
Note that it is not completely absurd to include a separate filesystem traversal library. From my readings about it, the boost::filesystem interface will eventually get incorporated into the new C++ standard as std::filesystem, which should make long-term maintenance of the code even easier (for now it's marked as experimental in recent g++ distributions, completely broken on Mac, sadly).
afafbioinfo
after the pull command, when launching: make clean && make && ./RNAStructViz --about I got the error: In file included from ConfigOptions.h:78:0, from AutoloadIndicatorButton.cpp:6: RNACUtils.cpp:210:10: fatal error: boost/filesystem.hpp: No such file or directory
include <boost/filesystem.hpp>
compilation terminated. Makefile:263: recipe for target 'BuildObjects/AutoloadIndicatorButton.o' failed make[1]: *** [BuildObjects/AutoloadIndicatorButton.o] Error 1
Wondering how to deal with this issue? thank you,