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hakyimlab
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PrediXcan
PrediXcan Project
MIT License
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PrediXcan.py --predict issue
#39
ZhenyaoYe
closed
1 year ago
0
predict.py error
#38
ghost
opened
3 years ago
0
enable rev-comp to deal with indel alleles (esp when using MASHR dbs)
#37
duanyuncheng
opened
3 years ago
0
Patch 1
#36
theMechanic23
closed
3 years ago
0
dbSNP version 150 file for mapping SNPs
#35
wangfan860
closed
5 years ago
1
added_code_of_conduct
#34
jiamaozheng
closed
5 years ago
0
Give an example of gene list?
#33
dietmarfdz
closed
5 years ago
1
AttributeError: TranscriptionMatrix instance has no attribute 'gene_list'
#32
julandalf
closed
5 years ago
3
convert_plink_to_dosage.py
#31
julandalf
closed
6 years ago
0
what is the parameter setting when using elastic net using glmnet package
#30
yuanzhongshang
closed
5 years ago
1
Gene_list Attribute Error
#29
yunjuyang
closed
5 years ago
12
Full DB for missing genes
#28
JYE-Lee
closed
5 years ago
6
README Formatting, Output Parameters, Print Statements
#27
ScottPDickinson
closed
7 years ago
0
PredictDB 1KG Data Availability
#26
zgoodwin
closed
8 years ago
2
How to handle the missing dosages?
#25
drveera
closed
8 years ago
2
Readme Updates for new models
#24
ScottPDickinson
closed
8 years ago
0
fix strand issues for non-ambiguous SNPs
#23
joseffrank
closed
8 years ago
1
optimizing PrediXcan
#22
ScottPDickinson
closed
8 years ago
0
Master
#21
ScottPDickinson
closed
8 years ago
0
Master
#20
ScottPDickinson
closed
8 years ago
0
Master
#19
ScottPDickinson
closed
8 years ago
0
Association tests and mod of prediction output
#18
ScottPDickinson
closed
8 years ago
0
Association tests and mod of prediction output
#17
ScottPDickinson
closed
8 years ago
0
Handling flipped ref alleles in dosage files (encoded 0 to 2)
#16
hainswor
closed
8 years ago
1
Wrapper for association tests
#15
ScottPDickinson
closed
8 years ago
0
merge with base fork
#14
hwheeler01
closed
8 years ago
0
adjust betas by dividing by the genotype sd, so don't have to scale g…
#13
hwheeler01
closed
9 years ago
1
Script for converting data from plink to dosage format now works correctly.
#12
sritchie73
closed
9 years ago
14
Ignores files without the gzip extension
#11
sritchie73
closed
9 years ago
5
Gene Association Extension
#10
ScottPDickinson
closed
9 years ago
0
Gene Association Extension
#9
ScottPDickinson
closed
9 years ago
0
Development
#8
ScottPDickinson
closed
9 years ago
0
updated figures 3-5 to Nature Genetics style
#7
hwheeler01
closed
9 years ago
0
Merge pull request #4 from hakyimlab/master
#6
hakyim
closed
9 years ago
0
Merge pull request #3 from hakyimlab/master
#5
hakyim
closed
9 years ago
0
update figs and code with mean R2/h2
#4
hwheeler01
closed
9 years ago
0
merging changes
#3
hakyim
closed
9 years ago
0
add mean h2 and R2 calc in response
#2
hwheeler01
closed
9 years ago
0
Merge pull request #1 from hakyimlab/master
#1
hakyim
closed
9 years ago
0