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hammerlab
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secotrec
Setup Coclobas/Ketrew Clusters
Apache License 2.0
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Add option to run Ketrew in Read-only mode
#86
smondet
closed
6 years ago
0
Unable to install
#85
iskandr
opened
6 years ago
20
Updates to secotrec local
#84
smondet
closed
6 years ago
0
Add link to Wobidisco tutorials
#83
smondet
closed
6 years ago
0
Force access rights of the tmp-dir
#82
smondet
opened
6 years ago
1
Fix `/tmp` usage
#81
smondet
closed
6 years ago
0
Make docker-compose tmp-dir configurable (+ unique?)
#80
smondet
closed
6 years ago
0
Fix `?userinfo` argument for test-job generation
#79
smondet
closed
7 years ago
0
Remove `wkhtmltopdf` installation from the Docker build file
#78
armish
opened
7 years ago
0
Local docker fixes & improvements
#77
smondet
closed
7 years ago
0
secotrec-*: allow custom docker-image for coclobas and ketrew servers
#76
smondet
closed
7 years ago
0
Improve AWS deployments (and a couple other things)
#75
smondet
closed
7 years ago
0
add a new seco command (`deploy-debug-pod`) for better debugging
#74
armish
closed
7 years ago
1
And the crazy idea about even better scaling and becoming fault tolerant
#73
armish
opened
7 years ago
0
The default cluster settings might not be ideal to carry the workload that we do
#72
armish
opened
7 years ago
0
The very first members of the cluster are suffering the most
#71
armish
opened
7 years ago
0
Workflows start failing when relatively unhealthier/old nodes don't pull new images
#70
armish
opened
7 years ago
0
retry `describe-mount-targets` in EFS mounting
#69
smondet
opened
7 years ago
0
AWS Batch + EFS Weird failure
#68
smondet
opened
7 years ago
0
Add a flag to the `down` subcommand to force confirm the operation
#67
armish
closed
7 years ago
0
Kube-clusters loose DNS access
#66
smondet
opened
7 years ago
4
AWS/Docker related fixes
#65
smondet
closed
7 years ago
0
Oracle-java-7 discontinued
#64
smondet
closed
7 years ago
3
Need a new URL for downloading `wkhtmltopdf`
#63
smondet
closed
7 years ago
8
Generate EFS/NFS mount calls in the AWS-style biokepi-machine
#62
smondet
closed
7 years ago
0
Need a separate docker-image for tlstunnel
#61
smondet
closed
7 years ago
0
Image `biokepi-run-aws` needs `nfs-common`
#60
smondet
closed
7 years ago
1
More AWS Setup
#59
smondet
closed
7 years ago
0
Update NetMHC configuration handling to sync with Biokepi
#58
armish
closed
7 years ago
0
Make biokepi-work optional in local-example
#57
smondet
closed
7 years ago
0
If resource exist, secotrec errors:
#56
ihodes
opened
7 years ago
0
secotrec-gke: fix typo in subcommand (varirables -> variables)
#55
armish
closed
7 years ago
1
Add a command to get a tty in a docker image with all the NFS mounts etc
#54
ihodes
closed
7 years ago
1
Update README.md
#53
e5c
closed
7 years ago
1
More small tweaks and fixes
#52
smondet
closed
7 years ago
0
Add libbz2-dev to Docker image for bcftools
#51
ihodes
closed
7 years ago
0
Couple of fixes
#50
smondet
closed
7 years ago
0
Improve make-dockerfiles further
#49
smondet
closed
7 years ago
1
Proper command line options for `make-dockerfiles`
#48
smondet
closed
7 years ago
0
Option to force rebuild of images
#47
smondet
closed
7 years ago
0
Option to push images to the Docker Hub
#46
smondet
closed
7 years ago
1
Minor fixes
#45
smondet
closed
7 years ago
0
Additions to #43
#44
smondet
closed
7 years ago
0
Use mounted scripts for Docker-compose services
#43
smondet
closed
7 years ago
1
Add command to do all the NFS mounts
#42
smondet
opened
7 years ago
0
Error when using many NFS servers
#41
tavinathanson
closed
7 years ago
1
Scripts without execute permissions
#40
julia326
closed
7 years ago
12
README needs better summary of the project.
#39
iskandr
opened
7 years ago
0
be more parsimonious about adding project-wide ssh keys on google cloud
#38
timodonnell
opened
7 years ago
1
gcloud set project -> gcloud config set project
#37
ihodes
closed
7 years ago
1
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