Problem running all the tests for DSTU3 in a docker container

[caetanopaulo]

Issue We are trying to run the unit tests just for DSTU3 in a docker container (using builtKit for .M2 caching purposes). But we keep seeing 4 tests failing:

- FhirResourceDaoR4SearchWithElasticSearchTest.testExpandVsWithMultiInclude_All ? IllegalState
- FhirResourceDaoR4SearchWithElasticSearchTest.testExpandVsWithMultiInclude_Some ? IllegalState
- FhirResourceDaoR4SearchWithElasticSearchTest.testExpandWithIsAInExternalValueSet ? IllegalState
- FhirResourceDaoR4SearchWithElasticSearchTest.testResourceTextSearch ? IllegalState

Environment:

• HAPI FHIR Version: 4.2.0
• OS: Docker container based on hapiproject/hapi:base
• Browser NA

Additional context

We are building the build image with this command from TFS (our CI server): docker build --tag ph3-dev/hapi-fhir-build:4.3.0-238348-Quick-HAPI-Build.1 --target build-hapi -m 4g .

Here's the docker file:

FROM hapiproject/hapi:base as build-hapi
ENV MAVEN_OPTS="-Xmx2048M -Xss128M -XX:MetaspaceSize=512M -XX:MaxMetaspaceSize=1024M -XX:+CMSClassUnloadingEnabled -XX:+UseConcMarkSweepGC"

RUN mkdir -p /tmp/hapi-fhir/
COPY ./hapi-fhir /tmp/hapi-fhir
WORKDIR /tmp/hapi-fhir/
RUN --mount=type=cache,target=/root/.m2 /tmp/apache-maven-3.6.2/bin/mvn clean
RUN --mount=type=cache,target=/root/.m2 /tmp/apache-maven-3.6.2/bin/mvn dependency:resolve
RUN --mount=type=cache,target=/root/.m2 /tmp/apache-maven-3.6.2/bin/mvn -P STU3SERVER,NOPARALLEL,NOUNITTESTS install

WORKDIR /tmp
RUN mkdir -p /tmp/hapi-fhir-jpaserver-starter
COPY ./pom.xml /tmp/hapi-fhir-jpaserver-starter
COPY ./src /tmp/hapi-fhir-jpaserver-starter/src

WORKDIR /tmp/hapi-fhir-jpaserver-starter
RUN --mount=type=cache,target=/root/.m2 /tmp/apache-maven-3.6.2/bin/mvn install -DskipTests

FROM tomcat:9-jre11

RUN mkdir -p /data/hapi/lucenefiles && chmod 775 /data/hapi/lucenefiles
COPY --from=build-hapi /tmp/hapi-fhir-jpaserver-starter/target/*.war /usr/local/tomcat/webapps/

EXPOSE 8080

CMD ["catalina.sh", "run"]

Here's how the configure the STU3SERVER profile:

<profile>
    <id>STU3SERVER</id>
    <modules>
            <module>hapi-fhir-bom</module>
        <module>hapi-deployable-pom</module>
        <module>hapi-fhir-base</module>
        <module>hapi-fhir-docs</module>
        <module>hapi-fhir-test-utilities</module>
        <module>hapi-fhir-server</module>
        <module>hapi-fhir-converter</module>
        <module>hapi-fhir-validation</module>
        <module>hapi-fhir-structures-dstu3</module>
             <module>hapi-fhir-validation-resources-dstu3</module>
        <module>hapi-fhir-jpaserver-model</module>
        <module>hapi-fhir-jpaserver-searchparam</module>
        <module>hapi-fhir-jpaserver-subscription</module>
        <module>hapi-fhir-jpaserver-base</module>
        <module>hapi-fhir-jpaserver-migrate</module>
        <module>hapi-fhir-dist</module>
        <module>tests/hapi-fhir-base-test-mindeps-server</module>
        <module>hapi-fhir-spring-boot</module>
    </modules>
</profile>

We are running the tests with this command:

run --rm -v "$PWD"/target:/usr/src/app/target -w /tmp/hapi-fhir/ ph3-dev/hapi-fhir-build:4.3.0-238348-Quick-HAPI-Build.1 /tmp/apache-maven-3.6.2/bin/mvn -P STU3SERVER test

What are we missing?

Thanks in advance.

[jamesagnew]

The tests are passing in CI, so I'm not really clear what we could do about this issue? It seems liek it's probably specific to your environment..

[caetanopaulo]

Thanks for the feedback @jamesagnew Keep up the good work.