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hcdenbakker
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sepia
taxonomic classifier based on the kraken2 algorithms and more
GNU General Public License v3.0
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add to crates.io
#36
jianshu93
opened
3 months ago
0
Wrong -V output for sepia 1.0.1
#35
hmontenegro
opened
2 years ago
0
error: linking with x86_64-conda-linux-gnu-cc failed: exit status: 1
#34
Valentin-Bio-zz
opened
2 years ago
1
update main to include read_filter subcommand
#33
hcdenbakker
closed
2 years ago
0
add read_filter subcommand and further integration of needletail
#32
hcdenbakker
closed
2 years ago
0
[release] Binary not working, maybe shipping a statically linked one?
#31
telatin
closed
2 years ago
3
[feature request] Option to save (un)classified reads
#30
telatin
opened
2 years ago
1
bump up to version 1.0.0
#29
hcdenbakker
closed
2 years ago
0
update version in main.rs
#28
hcdenbakker
closed
2 years ago
0
add link to releases to readme
#27
hcdenbakker
closed
2 years ago
0
updated README.md
#26
hcdenbakker
closed
2 years ago
0
corrected formula to estimate index size
#25
hcdenbakker
closed
2 years ago
0
add CONTRIBUTING.md and update README.md
#24
hcdenbakker
closed
2 years ago
0
Clippy
#23
hcdenbakker
closed
2 years ago
0
Memory mapped index
#22
Midnighter
closed
2 years ago
1
Compile error for ARM64
#21
sirselim
closed
2 years ago
2
Compliling error for macOS M1
#20
jianshu93
closed
2 years ago
5
Clippy
#19
hcdenbakker
closed
2 years ago
0
update readme to explain fourth column summary
#18
hcdenbakker
closed
3 years ago
0
JOSS Review
#17
telatin
closed
2 years ago
2
JOSS Review
#16
telatin
closed
3 years ago
1
Update on test.sh script and splash screen
#15
telatin
closed
3 years ago
1
Joss
#14
hcdenbakker
closed
3 years ago
0
Fix cargo clippy warnings
#13
Ebedthan
closed
3 years ago
2
travis.yml added
#12
hcdenbakker
closed
3 years ago
0
test and batch_example file added
#11
hcdenbakker
closed
3 years ago
0
change version from 0.0.1 to 0.0.2
#10
hcdenbakker
closed
3 years ago
0
Development
#9
hcdenbakker
closed
3 years ago
0
init-paper
#8
lskatz
closed
3 years ago
0
batch search abort when index is too large
#7
hcdenbakker
closed
3 years ago
0
abort when building/reading index too large for RAM; also for batch search
#6
hcdenbakker
closed
3 years ago
0
abort when building/reading index too large for RAM
#5
hcdenbakker
closed
3 years ago
0
fix pe classification
#4
hcdenbakker
closed
3 years ago
0
total read length sepia classify
#3
hcdenbakker
closed
3 years ago
0
document the references file
#2
lskatz
closed
3 years ago
1
Error checking
#1
lskatz
closed
2 years ago
3