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hemberg-lab
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scmap
A tool for unsupervised projection of single cell RNA-seq data
http://bioconductor.org/packages/scmap
GNU General Public License v3.0
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Add 'codetools' to Suggests:
#40
HenrikBengtsson
opened
1 year ago
0
Questions about confidence scores
#39
Kevis9
opened
1 year ago
0
Quite low accuracy using index cluster
#38
Kevis9
opened
2 years ago
2
Error on scmapCell
#37
FionaMoon
closed
2 years ago
1
What kind of reference dataset can be use?
#36
FionaMoon
closed
2 years ago
2
Error using scmapCluster
#35
GabrielBaldissera
closed
2 years ago
2
Big dataset issue
#34
Diennguyen8290
opened
2 years ago
7
Heat map missing data
#33
ivanaarellano
opened
3 years ago
2
How should I import data from seurat to scmap?
#32
jsonProgram
opened
3 years ago
0
error on selectFeatures
#31
kehuangke
opened
3 years ago
5
Encountering problems with selectFeatures
#30
sagnikbanerjee15
opened
3 years ago
1
error in selectFeatures
#29
pongslepha
closed
3 years ago
1
Similarity values are not between 0 and 1
#28
hayfre
opened
3 years ago
4
Issue with scmap-cluster function output/ Variable inconsistent assignment
#27
finjen
opened
3 years ago
2
Cancer tumor reference dataset
#26
levinhein
opened
4 years ago
2
Different number of elements passed to dot() function by scmapCell
#25
jma1991
closed
4 years ago
1
broken URL in README
#24
evanbiederstedt
closed
4 years ago
4
problem with scmapCluster
#23
ninggongzi
closed
4 years ago
3
scmapCell error
#22
yuqiyuqitan
opened
4 years ago
1
Outdated References
#21
DarioS
closed
4 years ago
1
sort similarities and indexes
#20
Arlene-1998
opened
4 years ago
1
Question about using sorted cell bulk microarray data (ImmGen) as reference
#19
atakanekiz
closed
4 years ago
1
Poor self-mapping with SMART-seq data
#18
a-solovyev12
opened
4 years ago
1
large part of the heatmap of select features is blank
#17
Jiam1ng
opened
5 years ago
6
Problem with selectFeatures
#16
massonix
opened
5 years ago
5
Why are the clusters of the reference dataset changed?
#15
xbjie123
closed
5 years ago
6
not able to plot sankey diagram
#14
MichaelPeibo
closed
5 years ago
4
selectFeatures() Error
#13
lololiam
closed
5 years ago
9
getSankey function
#12
aopisco
opened
6 years ago
1
how close from a cluster is something unassigned?
#11
aopisco
opened
6 years ago
2
Investigating bad self-mapping of a dataset
#10
mxposed
closed
6 years ago
4
Normalisation best practices
#9
mxposed
closed
6 years ago
3
Are SVM/RF implementations available through scmap?
#8
CodeInTheSkies
opened
6 years ago
2
Saving the Sankey Diagram as a PDF file
#7
CodeInTheSkies
closed
6 years ago
4
Some general questions about scmap
#6
CodeInTheSkies
closed
6 years ago
2
Order of cells in "scmapCluster_results$scmap_cluster_labs"
#5
CodeInTheSkies
opened
6 years ago
1
scmap and RF/SVM comparisons
#4
CodeInTheSkies
closed
6 years ago
5
Feature selection
#3
davetang
closed
6 years ago
2
trouble installing scmap
#2
dat4git
closed
7 years ago
3
scfinemap
#1
ay2sanger
closed
7 years ago
0