hiclib / pastis

Poisson-based algorithm for stable inference of DNA Structure
http://hiclib.github.io/pastis/
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mapping between the HiC contact map and the 3D model #76

Open jazberna1 opened 3 years ago

jazberna1 commented 3 years ago

Hello Pastis team,

I am very new to 3D models so please excuse me if my question does not make sense. I was wondering if it is possible to have a maping between a pbd file and the HiC contact map matrix.

The reason for asking this is that I plan to annotate genes on a HiC contact map matrix. Then, once I had the corresponding pdb file as generated by pastis I would like to annotate the genes on the 3D model (my own visualization script).

Many thanks Jorge