Closed JenniferSplaine closed 11 years ago
A couple of issues were identified:
Summary: When deconvoluting (going from 1536 to 384, for instance), the collation ordering always must have "plates-quadrants" last. What this means is that the 4 quadrants of the 1536 plate must first divide into the first 4 (386 well) plates given, the next 4 quadrants to the next 4 386 plates, and so forth.
So matrix 1 deconvolutes into 4 matrices; which are assigned to the first 4 plates.
To support deconvolution, the following collation orderings were added:
replicates->conditions->readouts->plates->quadrants replicates->readouts->conditions->plates->quadrants readouts->replicates->conditions->plates->quadrants readouts->conditions->replicates->plates->quadrants conditions->readouts->replicates->plates->quadrants conditions->replicates->readouts->plates->quadrants
Sean Where are we with 1536 in the raw data transformer. I thought it was working and we tested last year. Then the raw data transformer got a rewrite. was the 1536 part updated? As luck would have it i have a 1536 screen currently. Tried to use the transformer this evening and its not working like its supposed to. Putting the data in the 4 384 wells plates wrong and each plate has only 369 wells not 384. Can you look into this? I can hand format for now but it will have to be fixed as we have 2 1536 well screen looming
thanks Jen