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hoelzer
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pocp
Calculation of the Percentage of Conserved Proteins following Qin, Xie et al. 2014 but using DIAMOND instead of BLASTP for alignments.
GNU General Public License v3.0
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POCP X AAI
#26
shlomobl
opened
5 days ago
1
An emty resutl
#25
Rathanin-github
closed
1 month ago
4
Add heatmap
#24
hoelzer
closed
1 month ago
0
Publish Prokka GFF and not only the FAA file
#23
hoelzer
closed
1 month ago
0
Conda issues when running the workflow
#22
guosongjia
closed
1 month ago
3
Completes without running diamond,pocp,pocp matrix task.
#21
APrabhu21
closed
5 months ago
2
Update info mssg
#20
hoelzer
closed
8 months ago
0
typo
#19
hoelzer
closed
9 months ago
0
Add comparison BLASTP vs. DIAMOND
#18
hoelzer
closed
9 months ago
0
Revision
#17
hoelzer
closed
9 months ago
0
Adjustments after review comments
#16
hoelzer
closed
9 months ago
0
Add python script to produce heatmap automatically
#15
hoelzer
opened
11 months ago
2
Implement one-vs-all comparisons
#14
hoelzer
closed
11 months ago
0
Calculate POCP for 1-vs-all | Nextflow support
#13
garrison-chen
closed
11 months ago
4
finalize blast-diamond switch
#12
hoelzer
closed
1 year ago
1
Replace blast by diamond
#11
michoug
closed
1 year ago
3
Replace blast by diamond
#10
michoug
closed
1 year ago
2
Missing python in blast.yaml environment
#9
michoug
closed
1 year ago
1
finalize Help
#8
hoelzer
closed
1 year ago
0
Nextflow implementation
#7
hoelzer
closed
1 year ago
0
Merge pull request #1 from hoelzer/master
#6
hoelzer
closed
1 year ago
0
Nextflow implementation of the scripts
#5
hoelzer
closed
1 year ago
0
Avoid existing calculations
#4
sgarciah12
closed
1 year ago
5
solve #2
#3
hoelzer
closed
4 years ago
0
How to compare one single genome A with multiple genomes(n>50)?
#2
liuqian666
closed
4 years ago
5
Each pair of POCP values is calculated twice
#1
fujch7
closed
4 years ago
7