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holoviz-topics
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neuro
HoloViz+Bokeh for Neuroscience
BSD 3-Clause "New" or "Revised" License
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GOAL: Develop Spike Motif workflow
#53
droumis
opened
1 year ago
0
GOAL: Develop linked ephys-sensor layout workflow
#52
droumis
opened
1 year ago
0
GOAL: Develop linked eeg-sensor layout workflow
#51
droumis
opened
1 year ago
0
GOAL: Develop Multimodal workflow
#50
droumis
opened
1 year ago
0
GOAL: spike raster count aggregation for x and y
#49
droumis
opened
1 year ago
0
GOAL: Waveform color per group + datashading + interactivity
#48
droumis
closed
3 weeks ago
0
Populate spike-raster and waveform readme and format workflow notebooks
#47
droumis
closed
1 year ago
0
GOAL `real-data`: Identify and incorporate real data into workflows
#46
droumis
closed
6 months ago
0
GOAL: Maintain scatter marker spread when zooming
#45
droumis
opened
1 year ago
0
GOAL: Create util to convert spike time formats
#44
droumis
opened
1 year ago
0
GOAL: Simulate spike time grouping based on motifs
#43
droumis
opened
1 year ago
0
GOAL: Summary stats for image stack
#42
droumis
opened
1 year ago
0
GOAL: Intensity histogram for image stack
#41
droumis
opened
1 year ago
0
GOAL: 2D annotation handling
#40
droumis
opened
1 year ago
0
GOAL: Utilize Panel Player widget for xarray playback
#39
droumis
closed
1 year ago
0
Populate workflow readmes
#38
droumis
closed
1 year ago
1
[GOAL] Subcoordinates stacked along Y-axis with 'group' support
#37
droumis
opened
1 year ago
1
GOAL: Minimap/RangeTool
#36
droumis
closed
6 months ago
1
[GOAL] Support Range Annotations
#35
droumis
opened
1 year ago
0
[GOAL] Scale bar
#34
droumis
opened
1 year ago
5
[EPIC] Multi-channel timeseries viewer
#33
droumis
opened
1 year ago
0
GOAL: Large-data-handling
#32
droumis
closed
3 months ago
1
Toggle between unstacked and overlaid (butterfly mode) channels
#31
droumis
opened
1 year ago
0
Demo holonote annotation in timeseries workflows
#30
droumis
closed
6 months ago
0
Implement option to clip signals beyond overlap amount
#29
droumis
opened
1 year ago
0
Benchmark speed of initial display, zoom, and pan
#28
droumis
closed
1 year ago
1
[GOAL] channel type grouping
#27
droumis
closed
3 months ago
1
Add player widget hvplot vidviewer and init hvNeuro module
#26
droumis
closed
1 year ago
0
Create panel for image histogram levels adjustment with simple viewer
#25
droumis
opened
1 year ago
0
Rand noise vid viewer
#24
droumis
closed
1 year ago
0
Update readme to reflect reorg
#23
droumis
closed
1 year ago
0
Reorganize repo into src and workflows at root
#22
droumis
closed
1 year ago
0
Format and standardize data gen code and eeg, vid viewer workflows
#21
droumis
closed
1 year ago
0
return time (in addition to frame) as coord for imaging stack
#20
droumis
opened
1 year ago
0
Demo spike raster via hv.Scatter(...).opts(marker=dash, angle=90)
#19
droumis
closed
1 year ago
1
quick fix to opts bug
#18
droumis
closed
1 year ago
0
Adapt VArrayViewer from minian viz
#17
droumis
closed
1 year ago
1
Refactor miniscope simulation into neurodatagen
#16
droumis
closed
1 year ago
0
Sim and view imaging data w minian tools
#15
droumis
closed
1 year ago
0
Utilize MEArec for ephys and waveform template generation
#14
droumis
closed
6 months ago
0
Create spike raster demo
#13
droumis
closed
1 year ago
0
Create waveform viewer demo
#12
droumis
closed
1 year ago
0
Visualize simulated raw ephys data with minimap
#11
droumis
closed
1 year ago
0
Simulate raw extracellular electrophysiological data
#10
droumis
closed
1 year ago
0
log EEG notes in wiki
#9
droumis
closed
1 year ago
1
log imaging notes in wiki
#8
droumis
closed
6 months ago
0
log ephys notes in wiki
#7
droumis
closed
1 year ago
1
Create zscore minimap for EEG viewer with RangeTooLlink
#6
droumis
closed
1 year ago
0
Generalize eeg generator for power law exponent
#5
droumis
closed
1 year ago
0
Generate realistic EEG
#4
droumis
closed
1 year ago
0
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