hoogenboom-group interactive-render-workflow issues

hoogenboom-group / interactive-render-workflow

Interactive workflow for aligning volume electron microscopy datasets.

GNU General Public License v3.0

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Add code to filter island tiles

#18 arentkievits closed 4 months ago
0
Remove island tiles

#17 arentkievits closed 4 months ago
0
`renderapi.client.pointMatchClient` breaks with `concurrent.futures.ThreadPoolExecutor`

#16 arentkievits closed 3 months ago
2
Actual multithreading in stitch_render-client

#15 skaracoban closed 6 months ago
0
Datasets in WebKnossos do not have the correct scale

#14 arentkievits closed 7 months ago
1
`Post-correction` breaks down if section contains too many artifacts

#13 arentkievits closed 8 months ago
2
Check fine alignment

#12 arentkievits closed 9 months ago
1
Add separate SIFT and RANSAC procedures

#11 arentkievits opened 9 months ago
0
Incorrect stack bounds and/or scaling factor of fine aligned stack

#10 arentkievits closed 9 months ago
1
Improve fine alignment by finetuning bigfeta parameters

#9 arentkievits opened 9 months ago
0
Improve alignment by merging stitching and alignment collections

#8 arentkievits closed 9 months ago
1
Implement effective multithreading

#7 arentkievits closed 9 months ago
2
Implement robust way to do rough alignment

#6 arentkievits opened 9 months ago
2
Visualize rough alignment, plot # point matches + location of said matches

#5 arentkievits closed 9 months ago
1
Add Tile Maps to visualize alignment errors

#4 arentkievits opened 10 months ago
0
`plotting.plot_stack_with_stitching_matches` fails if mosaics are not of the same size

#3 arentkievits closed 10 months ago
1
Add `aligner` notebook

#2 arentkievits closed 9 months ago
3
Add `postcorrect` notebook

#1 arentkievits closed 8 months ago
1