This repository includes data and analysis scripts to accompany:
Authors: Putnam, H.M., et al Journal: Link: Description: This repository provides data and scripts to analyze the influence of ocean acidification on juvenile geoduck DNA methylation and phenotype. Geoduck (X days old) were exposed to 3 differnt pH conditions for 23 days, placed in a common garden tank for 28 days at ambient pH, then in an outdoor common garden for X days and finally re-exposed to different pH treatments for X days. Performance was assessed via growth and survivorship and samples were collected for DNA and RNA analyses.
Contents: RAnalysis file contains three folders (Scripts, Data, Output)
Scripts:
Data:
Output: The directory containing the analysis results, figures, tables, and supplementary material.