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hubmapconsortium
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ontology-api
The HuBMAP Ontology Service
MIT License
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Add uniprot hgnc codes and relationships
#125
ChuckKollar
closed
2 years ago
0
Added tree more ontologies to the list of those that work: ORDO, MP, PR
#124
ChuckKollar
closed
2 years ago
0
Runs end-to-end without error for last production build
#123
ChuckKollar
closed
2 years ago
0
Test load various Ontologies:
#122
shirey
closed
2 years ago
0
Update ontology-api-spec.yaml
#121
ChuckKollar
closed
2 years ago
2
Updates to terms_term_id_terms.py
#120
ChuckKollar
closed
2 years ago
0
Mine HuBMAP term_ids from the HuBMAP Ontology Database
#119
ChuckKollar
closed
2 years ago
0
Hu bmap ontology api client
#118
ChuckKollar
closed
2 years ago
0
Include hubmap ontologies
#117
ChuckKollar
closed
2 years ago
0
v1.1.1 release - Add versioning, conf file mount, update docs, and deployment script
#116
yuanzhou
closed
2 years ago
0
Modify endpoints
#115
ChuckKollar
closed
2 years ago
0
Release versioning
#114
shirey
closed
2 years ago
1
Integrate Ontology for assay_types into Ne04j db
#113
ChuckKollar
closed
1 year ago
2
Release ontology-api to PROD
#112
shirey
closed
2 years ago
0
Confirm end-to-end/turnkey ETL for Ontology DB
#111
shirey
closed
2 years ago
0
Add HCA ontology to KG
#110
computationdoc
closed
1 year ago
1
Address risk of ingesting TTY NA as NaN in Pandas code
#109
computationdoc
opened
2 years ago
2
Develop cypher for variable length CUI-CUI API
#108
computationdoc
closed
1 year ago
1
Review and suggest changes to APIs deployed
#107
computationdoc
closed
1 year ago
1
Cypher injection API
#106
computationdoc
opened
2 years ago
2
Add HubMap Organ Ontology in a general way
#105
computationdoc
closed
1 year ago
1
Add CCO to KG
#104
computationdoc
closed
1 year ago
1
Add ORDO to KG
#103
computationdoc
closed
1 year ago
1
Add VARIO to KG
#102
computationdoc
closed
1 year ago
1
Add MP ontology to KG
#101
computationdoc
closed
1 year ago
1
Add PR ontology to KG
#100
computationdoc
closed
1 year ago
1
Add PheKnowLator and other build fixes
#99
ChuckKollar
closed
2 years ago
0
Identify what is gone wrong with CL
#98
ChuckKollar
closed
2 years ago
1
Identify CCF not obviously in database
#97
ChuckKollar
closed
2 years ago
1
Address OWLNETS files that are non-conformant TSVs
#96
ChuckKollar
closed
1 year ago
3
Address OELNETS files with no lables
#95
ChuckKollar
closed
1 year ago
1
How to make the Ontology RESTFul API Endpoints useful to persons outside out group now that it's locked down
#94
ChuckKollar
closed
2 years ago
0
Add the semantic type assignment post database build and before going read-only on the neo4j database.
#93
ChuckKollar
opened
2 years ago
3
Grab the http download that Jonathan's code save it and Jonathan's code will use that file.
#92
ChuckKollar
closed
1 year ago
3
Build spatial database and API (Epoch)
#91
ChuckKollar
closed
2 years ago
4
HuBMAP Application Ontology: Organs
#90
ChuckKollar
closed
1 year ago
1
Add HubMap Assay Ontology in a general way
#89
ChuckKollar
closed
2 years ago
1
Backend support for Ontology search widget
#88
ChuckKollar
closed
2 years ago
0
Merge Ontology APi branches into Master
#87
ChuckKollar
closed
2 years ago
0
Tweeks to Ontology API deployment
#86
ChuckKollar
closed
1 year ago
0
Docker and uWSGI tweaks
#85
yuanzhou
closed
2 years ago
0
Yuanzhou/api deploy auth
#84
yuanzhou
closed
2 years ago
0
Configuretion element in the neo4j config file that can make the database readonly
#83
ChuckKollar
closed
2 years ago
0
Properly capture Code and CUI labels
#82
ChuckKollar
closed
2 years ago
2
Post neo4j cypher that adds the CUI symentics TUI
#81
ChuckKollar
closed
2 years ago
1
Item that needs to be run in cypher after everything is done.
#80
ChuckKollar
opened
2 years ago
3
Add remaining ontologies
#79
shirey
closed
2 years ago
1
API Documentation
#78
shirey
closed
2 years ago
0
Replace existing codebase
#77
shirey
closed
2 years ago
0
Get PheKnowLater working with Jonathan's Pandas code
#76
ChuckKollar
closed
2 years ago
0
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