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human-pangenomics
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HPRC_Assembly_Hub
MIT License
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Browser doesn't show GenBank accession in main view
#29
diekhans
opened
1 year ago
0
GRCh38 should be standard hg38 browser
#28
diekhans
opened
1 year ago
0
Release2 jbdev into release2
#27
diekhans
closed
1 year ago
0
add track documentation for CAT annotations
#26
diekhans
closed
1 year ago
0
ensembl needs extra indexes
#25
diekhans
closed
1 year ago
1
add trix indexes to gene and other tracks that need case-insensive search
#24
diekhans
closed
1 year ago
1
missing hub overview description page
#23
Jeltje
opened
1 year ago
0
Need per-assembly description.html
#22
Jeltje
opened
1 year ago
0
Description files for PGGB chain, snake chain and regular chain missing
#21
Jeltje
opened
1 year ago
0
Error in NA19240.1
#20
diekhans
closed
1 year ago
1
run hubcheck
#19
diekhans
closed
1 year ago
1
make Ensembl genes the default
#18
diekhans
closed
1 year ago
4
GRCh38/PGGP chains tracks point to the same file
#17
diekhans
closed
1 year ago
1
hub build scripts are not robust
#16
diekhans
opened
1 year ago
0
Add color coding to Ensembl tracks
#15
diekhans
closed
1 year ago
0
HPRC as a track hub on top of GenArk
#14
diekhans
opened
1 year ago
0
Generall usablity issues from GB group
#13
diekhans
opened
1 year ago
0
would shellcheck be useful?
#12
diekhans
opened
1 year ago
0
figure out how to maintain the repo for muitple HPRC release
#11
diekhans
opened
1 year ago
1
bring hub up to public assembly hub standards
#10
diekhans
opened
1 year ago
2
Hub contact is incorrect
#9
diekhans
closed
1 year ago
1
Rename haplotypes identifiers
#8
diekhans
opened
1 year ago
1
https leads to an error
#7
maximilianh
opened
1 year ago
2
Hub needs chromAlias files or at least some way to find a chromosome.
#6
maximilianh
opened
1 year ago
1
hg38 tracks on a track hub
#5
maximilianh
opened
1 year ago
3
Add official Ensembl genes to paper hub
#4
diekhans
closed
1 year ago
1
need to figure out to name paper vs general use browser
#3
diekhans
opened
1 year ago
1
hprc browser doesn't know it's own DNS name
#2
diekhans
opened
1 year ago
1
add program to convert Ensembl HPRC GFF3 to bigGenePred style bigBed …
#1
diekhans
closed
1 year ago
1