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hzi-bifo
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mdasim
MDAsim 2: a Multiple Displacement Amplification Simulator (continued development from: https://sourceforge.net/projects/mdasim/)
GNU General Public License v3.0
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spurious strand swap of introduced errors
#21
dlaehnemann
opened
6 years ago
1
Fragments that cannot be aligned with reference
#20
VSack
closed
6 years ago
10
package 2.1.0 for bioconda once cb3 update there is done
#19
dlaehnemann
closed
6 years ago
1
Error log positions != Fragment output positions
#18
VSack
closed
6 years ago
1
remove unnecessary (and confusing) fasta header tags from output
#17
dlaehnemann
closed
6 years ago
0
clean up and document code
#16
dlaehnemann
closed
6 years ago
7
inferring correct positions on original MDAsim input sequence
#15
dlaehnemann
closed
6 years ago
7
unique names for resulting amplicon fasta sequences
#14
dlaehnemann
closed
6 years ago
0
Header for error log
#13
VSack
closed
6 years ago
3
Segmentation fault when folder not existing
#12
VSack
closed
6 years ago
4
logging output with sequence name
#11
dlaehnemann
closed
6 years ago
5
`Floating point exception` on small input sequences with low target coverage
#10
dlaehnemann
opened
6 years ago
0
evaluation pipeline improvements
#9
dlaehnemann
closed
6 years ago
1
try deleting subfolders of `src` folder
#8
dlaehnemann
closed
6 years ago
2
`mkdir` for `obj` `lib` and `bin` in the Makefile
#7
dlaehnemann
closed
6 years ago
6
version output generation based on prog and PACKAGE_STRING variables
#6
dlaehnemann
closed
6 years ago
0
make MDA error rate a command line argument
#5
dlaehnemann
closed
6 years ago
0
create new GitHub release and package it for bioconda
#4
dlaehnemann
closed
6 years ago
2
minor cleanups
#3
dlaehnemann
closed
6 years ago
3
test output for presence and correctness of single nucleotide errors
#2
dlaehnemann
closed
6 years ago
23
single nucleotide error log
#1
dlaehnemann
closed
6 years ago
4