instadeepai / InstaNovo

De novo peptide sequencing with InstaNovo: Accurate, database-free peptide identification for large scale proteomics experiments
Apache License 2.0
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build(deps): update griffe requirement from <0.48.0 to <1.3.0 #49

Closed dependabot[bot] closed 2 weeks ago

dependabot[bot] commented 1 month ago

Updates the requirements on griffe to permit the latest version.

Release notes

Sourced from griffe's releases.

1.2.0

1.2.0 - 2024-08-23

Compare with 1.1.1

Features

  • Support attribute syntax in __all__ values (ad99794 by Timothée Mazzucotelli). Issue-316
Changelog

Sourced from griffe's changelog.

1.2.0 - 2024-08-23

Compare with 1.1.1

Features

  • Support attribute syntax in __all__ values (ad99794 by Timothée Mazzucotelli). Issue-316

1.1.1 - 2024-08-20

Compare with 1.1.0

Bug Fixes

  • Pre-emptively expand __all__ values and wildcard imports before firing the on_package_loaded event (21b3780 by Timothée Mazzucotelli).

1.1.0 - 2024-08-17

Compare with 1.0.0

Features

  • Add on_wildcard_expansion event (c6bc6fa by Timothée Mazzucotelli). Issue-282
  • Add on_alias event (a760a8c by Timothée Mazzucotelli). Issue-282
  • Pass loader to on_package_loaded hooks (7f82dc3 by Timothée Mazzucotelli).

1.0.0 - 2024-08-15

Compare with 0.49.0

V1! :rocket: :fire: :rainbow:

Breaking changes

Highlights:

  • Extensions inherit from Extension, (VisitorExtension and InspectorExtension are removed)
  • Members are serialized (as_dict/JSON) as a dictionary instead of a list
  • All objects are available in the top-level griffe module, nowhere else

Removed objects:

  • all modules under the griffe package
  • the griffe.DocstringWarningCallable class
  • the griffe.When class
  • the griffe.ExtensionType type
  • the griffe.InspectorExtension class
  • the griffe.VisitorExtension class
  • the griffe.HybridExtension extension
  • the griffe.patch_logger function

... (truncated)

Commits
  • 58eb9f4 chore: Prepare release 1.2.0
  • 6e8b3c3 docs: Summarize API in the top-level module docstring
  • e5fa798 ci: Quality
  • 22be256 docs: Don't render same API objects in multiple places
  • ad99794 feat: Support attribute syntax in __all__ values
  • 86cda59 tests: Clean up tests
  • 551b6e7 chore: Prepare release 1.1.1
  • 02706fc chore: Revert debug message about objects exposed from external modules
  • 97f3613 ci: Enable more Ruff rules
  • 21b3780 fix: Pre-emptively expand __all__ values and wildcard imports before firing...
  • Additional commits viewable in compare view


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dependabot[bot] commented 2 weeks ago

Superseded by #52.