iqbal-lab-org / minos

Variant call adjudication
MIT License
16 stars 5 forks source link

Missing jpeg library when building the Singularity image #112

Closed jordivea-odap closed 2 years ago

jordivea-odap commented 2 years ago

When building the singularity image, following the provided instructions, I got the following error.

During handling of the above exception, another exception occurred:

    Traceback (most recent call last):
      File "<string>", line 1, in <module>
      File "/tmp/pip-build-qw7in_h3/pillow/setup.py", line 1037, in <module>
        raise RequiredDependencyException(msg)
    __main__.RequiredDependencyException:

    The headers or library files could not be found for jpeg,
    a required dependency when compiling Pillow from source.

    Please see the install instructions at:
       https://pillow.readthedocs.io/en/latest/installation.html

I could solve it adding the the package libjpeg-dev to the apt-get install command in .ci/install_dependencies.sh