Allow to skip integerisation

iqbal-lab-org / pling

Plasmid analysis using rearrangement distances

MIT License

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Allow to skip integerisation #64

Closed babayagaofficial closed 3 weeks ago

babayagaofficial commented 3 weeks ago

Containment network is still calculated from nucmer, like in anno workflow, but then DCJ is calculated from a provided unimog file (one entry per genome, i.e. not pairwise defined). Solves #63