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iqbal-lab-org / viridian

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Suitability of 'Sydney' scheme for autodetection #77

Closed bede closed 2 years ago

bede commented 2 years ago

I've tested the following scheme working as a forced scheme, and wonder whether this scheme—very different to any other scheme I have encountered—is a good candidate for autodetection and further testing as a built in scheme

covid-sydney.vwf.tsv.txt

iqbal-lab commented 2 years ago

I'd like to propose, since you'll be getting informed by your users @bede that this is the scheme they're using, that you/gpas simply specify the scheme in the command line invocation of viridian. I think nick built this functionality in already. Anyway, will discuss at this end.

iqbal-lab commented 2 years ago

i think we've discussed this now. should go in as a known scheme but not auto-detect

bede commented 2 years ago

I'd like to propose, since you'll be getting informed by your users @bede that this is the scheme they're using, that you/gpas simply specify the scheme in the command line invocation of viridian. I think nick built this functionality in already. Anyway, will discuss at this end.

Agreed, thanks Zam