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iR+ Process for gene naming and analysis
#58
bcorrie
opened
3 years ago
19
Write report - Use case update
#57
bcorrie
closed
3 years ago
1
Analysis API YAML not passing validity check
#56
bcorrie
closed
3 years ago
3
What are we going to provide for WP4?
#38
schristley
closed
2 years ago
1
Test initial Stats visualization implementation on iReceptor Gateway
#15
bcorrie
closed
3 years ago
2
Test IPA and COVID19 repositories Stats APIs
#14
bcorrie
closed
3 years ago
1
New issue in issue repo
#1
bcorrie
closed
3 years ago
0
Test new issue in WP2 with not issue allowed
#7
bcorrie
closed
3 years ago
0
Test in WP2 from top level
#2
bcorrie
closed
3 years ago
0
New issue in WP2
#3
bcorrie
closed
3 years ago
0
Do something for Task 2.4
#4
bcorrie
closed
3 years ago
0
What Repertoire level Stats are required for Clones
#16
bcorrie
closed
1 year ago
14
Diversity metrics for Clone Stats
#17
bcorrie
closed
1 year ago
6
Identify FC data sets for training
#32
bussec
opened
3 years ago
2
Decide on ontology for cell type classification
#33
bussec
opened
3 years ago
0
Implementation of Receptor API on sciReptor
#34
bussec
opened
3 years ago
3
Bring Sorbonne repository into Production
#21
bcorrie
closed
1 year ago
1
Plan UI changes around cell and clone
#23
bcorrie
closed
1 year ago
1
Investigate performance issue on Sorbonne repository
#22
bcorrie
closed
1 year ago
1
Implement Clone API on Turnkey
#24
bcorrie
closed
1 year ago
2
What should Stats API return when missing a key?
#25
bcorrie
opened
3 years ago
5
Implement ADC API on ImmuneDB
#18
bcorrie
closed
1 year ago
21
Integrate sciReptor Cell endpoint into Gateway
#19
bcorrie
opened
3 years ago
4
Integrate ImmuneDB ADC API repository into Gateway
#26
bcorrie
closed
1 year ago
2
Implementation of ADC API on sciReptor
#20
bcorrie
opened
3 years ago
10
Implementation of Cell API on sciReptor
#27
bcorrie
opened
3 years ago
1
Query secure repository from the Gateway
#28
bcorrie
closed
1 year ago
4
Confirm it is possible to have a study as public
#29
bcorrie
closed
1 year ago
3
gene_usage analysis end point integrated with Gateway
#41
schristley
closed
2 years ago
10
Browsers have security that prevents mixed security content
#42
schristley
closed
1 year ago
13
Are we going to support data from multiple analyses in ADC and/or iR+ repositories?
#43
schristley
closed
2 years ago
26
How much to rely upon the query to define the data versus having additional analysis parameters?
#44
schristley
closed
2 years ago
2
additional parameters for gene_usage end point?
#45
schristley
closed
2 years ago
1
clone definition end point
#46
schristley
closed
2 years ago
1
Enclone tool for Tapis
#47
schristley
closed
2 years ago
1
Investigate integration of immuneML as a Tapis app
#48
schristley
opened
3 years ago
3
Design an asynchronous API as an extension to the ADC API for long-running queries and downloads
#49
schristley
closed
2 years ago
3
VDJServer Clone API prototype
#50
schristley
opened
3 years ago
5
Draft of AIRR Receptor schema
#31
schristley
closed
1 year ago
2
Turnkey Cell API prototype
#39
schristley
closed
1 year ago
2
Draft of AIRR Receptor API
#35
schristley
closed
2 years ago
1
Draft of AIRR Cell API
#36
schristley
closed
2 years ago
2
design and implement get_status end point for an analysis_id
#51
schristley
closed
2 years ago
1
Load 10X single-cell studies into VDJServer
#40
schristley
opened
3 years ago
1
VDJServer Cell API prototype
#37
schristley
opened
3 years ago
2
VDJServer downloads
#52
schristley
closed
1 year ago
23
Clonal analysis in Tapis
#53
schristley
opened
3 years ago
3
CDR3 analysis in Tapis
#54
schristley
opened
3 years ago
1
VDJServer Analysis API prototype service
#55
schristley
closed
2 years ago
1
Should we have a /locus Stat entry point?
#30
bcorrie
closed
1 year ago
5
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