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jackh726
/
bigtools
A high-performance BigWig and BigBed library in Rust
MIT License
65
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5
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Support for bigbed
#50
pkerpedjiev
closed
1 month ago
2
bedToBigBed allow1bpOverlap
#49
mrvollger
opened
1 month ago
0
Missing fields when using `-a` with bedtobigbed
#48
mrvollger
opened
1 month ago
19
Granularize api tests
#47
nvictus
closed
2 months ago
0
Add bb test files
#46
nvictus
closed
2 months ago
3
Refactor bigtools internals and API for writing
#45
jackh726
closed
2 months ago
1
Refactor pybigtools API
#44
jackh726
closed
2 months ago
0
pybigtools: NumPy 2.0
#43
nvictus
opened
2 months ago
3
Add more bigwigaverageoverbed stats
#42
ghuls
closed
2 months ago
19
Fix behaviour of names argument in bigWigAverageOverBed of pybigtools.
#41
ghuls
closed
3 months ago
1
Update citation
#40
nvictus
closed
3 months ago
0
Support specifying bed(Graph) input files as .gz
#39
jackh726
opened
3 months ago
4
Implement `-minMax` option of bigWigAverageOverBed.
#38
ghuls
closed
2 months ago
3
build: Add .cargo/config for project root `cargo build` on macos
#37
nvictus
closed
4 months ago
0
Specialized Python exceptions
#36
nvictus
closed
5 months ago
0
Make `is_bigwig`, `is_bigbed` properties
#35
nvictus
closed
5 months ago
0
Enhancements to Python writer API
#34
nvictus
opened
6 months ago
0
Enhancements to Python reader API
#33
nvictus
closed
2 months ago
0
Add "__version__" package attribute
#32
ghuls
closed
6 months ago
1
Update README.md
#31
nvictus
closed
6 months ago
0
Patch bump
#30
nvictus
closed
6 months ago
0
Change build steps
#29
nvictus
closed
6 months ago
0
minor pybigtools complaints
#28
sergpolly
closed
6 months ago
2
pybigwig regression writing bigwigs in >=0.1.1
#27
sergpolly
closed
6 months ago
3
Bump pybigtools for packaging fix
#26
nvictus
closed
6 months ago
0
Make sure license file is bundled with sdist
#25
nvictus
closed
6 months ago
0
Add CITATION.cff
#24
nvictus
closed
7 months ago
0
Update README.md
#23
nvictus
closed
7 months ago
0
Fix "read" feature.
#22
ghuls
closed
7 months ago
1
Add Zenodo badge
#21
nvictus
closed
7 months ago
0
Switch to rustls for attohttpc
#20
anderspitman
closed
7 months ago
2
Avoiding OpenSSL
#19
anderspitman
closed
7 months ago
2
bigtools bigwigtobedgraph hangs for certain bigwig file created with pyBigWig
#18
ghuls
closed
7 months ago
3
Move cancellation check to `build.commands`
#17
nvictus
closed
7 months ago
1
Fix typo
#16
nvictus
closed
7 months ago
0
Add logo
#15
nvictus
closed
7 months ago
0
Readthedocs configuration
#14
nvictus
closed
7 months ago
4
Conditional python release workflow
#13
nvictus
closed
7 months ago
0
Fix bigwigmerge.
#12
ghuls
closed
11 months ago
1
bigwigmerge: thread 'main' panicked at 'index out of bounds: the len is 0 but the index is 0'
#11
ghuls
closed
11 months ago
1
BED file with only 3 columns is not supported by bigwigaverageoverbed
#10
ghuls
closed
7 months ago
1
Different chromosome order with bigwigtobedgraph than with UCSC bigWigToBedGraph
#9
ghuls
closed
7 months ago
1
Bump openssl from 0.10.52 to 0.10.55
#5
dependabot[bot]
closed
1 year ago
0
Example of writing a bigbed
#4
mrvollger
closed
1 year ago
2
Fix bytes read in get_zoom_block_values
#3
pkerpedjiev
closed
1 year ago
0
"range end index 4 out of range for slice of length 3"
#2
jackh726
closed
7 months ago
1
make reqwests blocking for RemoteFile
#1
paul-sud
closed
4 years ago
3