These scripts break down into 5 parts:
Reads in the MACAU results and calculates standardized betas and p-values for each variable, stores them for downstream analyses.
Takes the output from Main Models and produces all of the main and supplementary figures in the manuscript.
Reproduces results in text, as they appear.
Demonstrates the initial processing workflow of raw mstarr data.
Code for generating permutation-based p-values and associated q-values for identifying regulatory and methylation-dependent regulatory activity.
Code for trimming, mapping, and filtering methylation data can be found https://github.com/janderson94/BaboonEpigeneticAging/tree/master/Trim_map_filter