jaswindersingh2 SPOT-RNA issues

jaswindersingh2 / SPOT-RNA

RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.

https://apisz.sparks-lab.org:8443/spot-rna-sz.html

Mozilla Public License 2.0

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服务器访问失败，利用然后下载的预训练模型预测RNA的结果精度较差

#28 President-T opened 1 year ago
0
Updated to run on Python 3.10

#27 nlabrad opened 1 year ago
1
Updating to a newer Python version to use newer tensor flow packages

#26 nlabrad opened 1 year ago
0
the untrained model

#25 sfsdfd62 opened 2 years ago
0
-> Small performance improvement - Varna "line" and "radiate" now computing in parallel

#24 vincbeaulieu opened 2 years ago
0
Bump numpy from 1.16.4 to 1.22.0

#23 dependabot[bot] opened 2 years ago
0
Revert "Bump numpy from 1.16.4 to 1.22.0"

#22 jaswindersingh2 closed 2 years ago
0
Bump numpy from 1.16.4 to 1.22.0

#21 dependabot[bot] closed 2 years ago
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Manipulating secondary structures images

#20 eltonjrv opened 2 years ago
0
Questions about result reproduction

#19 mydkzgj opened 2 years ago
0
small fix

#18 vincbeaulieu closed 2 years ago
0
Program hangs at "Preparing tfr records file for SPOT-RNA:"

#17 davidfstein opened 3 years ago
0
Could we get the output in the Vienna format?

#16 Codezy99 closed 3 years ago
2
model0.meta does not exist

#15 colsen-bu closed 3 years ago
2
About the output file

#14 Codezy99 closed 3 years ago
2
How did you determine the threshold "0.335"

#13 HarveyYan opened 3 years ago
2
How did you determine the threshold "0.335

#12 HarveyYan closed 3 years ago
0
free energy estimate is absent

#11 melonheader opened 3 years ago
0
'--plots' option doesn't work

#10 polarbe opened 3 years ago
0
Update SPOT-RNA.py

#9 MuhammedHasan closed 2 years ago
0
models file

#8 mehdi1902 opened 4 years ago
0
What causes the missing basepairs when going from SPOT-RNA to VARNA?

#7 Laura-Alex closed 4 years ago
0
Documentation

#6 wososa opened 4 years ago
0
tensorflow.Example exceeds maximum protobuf size of 2GB

#5 wososa closed 4 years ago
2
how to generate vectorgraph?

#4 tianxiahuihui closed 4 years ago
1
added dataset link from Nihao Cloud

#3 tcgriffith closed 4 years ago
1
download compressed file

#2 Ci-TJ closed 4 years ago
5
Old TensorFlow

#1 kentcr closed 4 years ago
1