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jbferet / biodivMapR

biodivMapR: an R package for α- and β-diversity mapping using remotely-sensed images
https://jbferet.github.io/biodivMapR/index.html
GNU General Public License v3.0
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biodiversity diversity-mapping hyperspectral-imaging remote-sensing sentinel-2 tropical-forest

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biodivMapR

An R package for α- and β-diversity mapping using remotely-sensed images

build licence version version

1 Install

The package remotes first needs to be installed from the CRAN

install.packages("remotes")

Then some packages which were removed from the CRAN may need to be installed directly from authors' repository. This is the case for dissUtils: 

remotes::install_github('cran/dissUtils')

After installing remotesand dissUtils, biodivMapR should be ready for installation with the following command line in your R session:

remotes::install_github('jbferet/biodivMapR')

2 Tutorial

A tutorial vignette is available here.

The corresponding script is available in file examples/tutorial.R.

3 Citation

If you use biodivMapR, please cite the following references:

Féret, J.-B., de Boissieu, F., 2019. biodivMapR: an R package for α‐ and β‐diversity mapping using remotely‐sensed images. Methods Ecol. Evol. 00:1-7. https://doi.org/10.1111/2041-210X.13310

Féret, J.-B., Asner, G.P., 2014. Mapping tropical forest canopy diversity using high-fidelity imaging spectroscopy. Ecol. Appl. 24, 1289–1296. https://doi.org/10.1890/13-1824.1

4 Acknowledgments / Fundings

This research was supported by the Agence Nationale de la Recherche (ANR, France) through the young researchers project BioCop (ANR-17-CE32-0001)