jbloomlab / phydms

phylogenetic analyses informed by deep mutational scanning data
GNU General Public License v3.0
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Rel FDR #34

Closed jon-mah closed 4 years ago

jon-mah commented 4 years ago

This PR implements a method for computing the false discovery rate for the random effects likelihood method for inferring sites under diversifying selection.

@skhilton: The purpose of this was to introduce the FDR control method. I computed the expected values by hand (actually by excel), to make sure that we are computing FDR correctly. When you get a chance, can you take a look at check over any of the things I might have missed?