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.. image:: https://img.shields.io/pypi/v/polyclonal.svg :target: https://pypi.python.org/pypi/polyclonal

.. image:: https://github.com/jbloomlab/polyclonal/actions/workflows/test.yaml/badge.svg :target: https://github.com/jbloomlab/polyclonal/actions/workflows/test.yaml

.. image:: https://img.shields.io/badge/code%20style-black-000000.svg :target: https://github.com/psf/black

.. image:: https://img.shields.io/endpoint?url=https://raw.githubusercontent.com/charliermarsh/ruff/main/assets/badge/v2.json :target: https://github.com/astral-sh/ruff

Model mutational escape from polyclonal antibodies using deep mutational scanning data.

polyclonal is a Python package written by the Bloom lab <https://jbloomlab.org>_.

See Yu et al (2022) <https://doi.org/10.1093/ve/veac110>_ for an explanation of the approach implemented in polyclonal.

The source code is on GitHub <https://github.com/jbloomlab/polyclonal>_.

See the polyclonal documentation <https://jbloomlab.github.io/polyclonal>_ for details on how to install and use polyclonal.

To contribute to this package, read the instructions in CONTRIBUTING.rst <CONTRIBUTING.rst>_.