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jhuguetn / cat12-docker

Docker image of CAT12 (standalone version)
GNU General Public License v3.0
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Report PDF and JPG Not Generating #10

Open spepperkumc opened 4 months ago

spepperkumc commented 4 months ago

Hello, I am having issues with the docker T1w segmentation not generating the corresponding pdf and jpg reports. Does anyone else have this issue? In the logs the only reference to them I am seeing is the following:

Remove "/data/report/catreport_ID_run-001_T1w.pdf" from dependency list because it does not exist! One or multiple files do not exist and were removed from the dependency list and following batches will may not work correctly!

Remove "/data/report/catreportj_ID_run-001_T1w.jpg" from dependency list because it does not exist! One or multiple files do not exist and were removed from the dependency list and following batches will may not work correctly!

jhuguetn commented 3 months ago

Hi @spepperkumc, thanks for reporting!
I was able to reproduce the problem running the Segmentation module from the latest version of CAT12 standalone (12.9). I've just opened a new issue (follow it here: https://github.com/ChristianGaser/cat12/issues/27), in the meantime you can alternatively use r2166 if that's a feasible option for you.

Since that Github repository of CAT12 will now host the standalone version binaries when a new version is formally released, I will consider fetching these Github release files from now on (see https://github.com/jhuguetn/cat12-docker/issues/11).