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jianyangqt / gcta

GCTA software
GNU General Public License v3.0
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Error: invalid option "--grm-sparse". #62

Closed zengjian0101 closed 11 months ago

zengjian0101 commented 11 months ago

Hi,

I am trying to run a --fastGWA-mlm-binary for a dataset, and I have updated GCTA to the latest 1.94.1 version, but this error still occurs. ###################################### Performing GLM to get the starting values of beta for the covariates... Error: XtWX is not invertible. An error occurs, please check the options or data

########################################### And I have checked my phenotype file , it is case=1 and control=0 format. I would be very appreciate if you could help me fix this bug.

Thanks in advance, Zeng Jian

zengjian0101 commented 11 months ago

and this is my code : gcta64 --bfile input --pheno phe --out out --thread-num 12 --joint-covar --qcovar pc10 --covar sex --fastGWA-mlm-binary --grm-sparse sp_grm