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jlopezalo / PyFMGUI

PyFMGUI is an application for the analysis of force microscopy data capable of analyzing Nanoscope and JPK AFM files.
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No files loading on GUI, issues installing from source code #14

Open Razza-Ripple opened 2 days ago

Razza-Ripple commented 2 days ago

Hi, I downloaded the zip file, extracted and opened, but when I try to open SPM or JPK files, the console says '0 files loaded' and nothing appears. I tried opening a folder with SPM files but this caused the software to crash completely. I had followed the download instructions via python but it kept saying about 'no module for pyqtgraph' and so wouldn't open the GUI via this either, so I can't tell if the issues I had were to do with the downloadable version being slightly different, or something else.

I'm not great with code, but was ideally looking for some python code so that I may run a load of SPM files on an HPC at my institute, obtained as ROIs I've manually obtained from larger PFC files. Any help with how I might go about this would be great. I came across your work via this article: https://open-research-europe.ec.europa.eu/articles/3-187

yogi-boi commented 2 days ago

Hi Rachel,

Thanks for reaching out!

Here’s the latest version of the code that the DyNaMo-INSERM lab team is working on. https://github.com/DyNaMo-INSERM/PyFMGUI_DyNaMo.git

I suggest you do a fresh install and create a new environment.

It would also be helpful if you could share the exact error message that outputted on the terminal.