jmvillaveces / cytokegg

Automatically exported from code.google.com/p/cytokegg
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CytoKegg

CytoKegg is a Cytoscape 3.4.0 app designed to import KEGG pathways to Cytoscape.

Features

Latest Release

Download the latest release here.

Usage

To search and import a KEGG pathway to Cytoscape simply go to Apps > CytoKegg > Search Pathways. Once there, select the target organism, type a pathway title and the click search. After that, select the target pathway and click open.

Similarly, to find KEGG pathways in a given network, go to Apps > CytoKegg > Find Pathways in Network. Once there select the network, the field containing your identifiers, the identifier type and click search.

Supported identifiers : uniprot, ncbi-proteinid, ncbi-geneid.

Contributing

If you want to help and add a new feature, just create a new pull request to merge in the cytoscape_3.4.0 branch.